AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Laca7g03194 ATGGAAGAATCGCAAGAGATTTTGTTGAATTCGCTGGCGAAAGCTGGGGTTGCGATTCCGCGGGAGGCTTTGTCAGTTGGAGATCTAACACCGGAAGCGTTGGTGTCGATCTGTGCTCATTCTCTTCGTATAATTTCGAGCTCGGAATCCTTTCCGATCACTTTGCCGGATTCTATGGTCGATCGTTTTAAAATCTGCACCGATCTTGCCTCATCCGTCAAAGACCTAGGTTACATCGGCGACATGAGCTTCCATAAGTTCCTGTATCCATCCGAAGAAGACATGTATAGGTTGATAAGATTTTTGGTTGGGAAGCTCTCTGAATCATCTACAACTGCAGTATTATTAAACACAAAGGATAATAATGCACAAGTAATGATAAATGATGAAAAATCAGAAAGATCATCCAATGATGAGGAACAAGATTTGCATACCAAATTCGAAGGCGTAAAACTGAGAACTGAAGAAGCGGTGTCAAATTCAATTCAATATCCTGAAGAAGATTTTGGAGCTCATGATTTGTTGAAAGCAGCAGTGGAAATGGCTTGTGATGAACAACACATCGATTCACACATTACACAGCTAAATGAGCAAATAGACGCAAGGAAAACCAATCTTGCAAAACTGGAGTCAAAATGGAAAGCCATCATAAAGCCTTTAGAAGATAAAAAAAGAAATCTTGAAGAAGCTCTATGTGCAAATCAGCCAGAGTCTCAAGACCTGGAGTCCATATTGTTTGAAACAAAGCAGAGGGAAGAGGAAATTTCCAAGGTGTCGAGAGAAGTTGAGAAAGTAGCGAAATTGGCAACAAGGAGATCTTACATTGAACGGATAAAAGAGATCACCAAAAATAGCAGGAAACAGGAGATTGACATAGAACGTATCTTAAAAGAGACCCGAGAGCTTCAGTTGGAAAGTAACATCATTCAAGAACGCCTGCATCGAACTTATGCTGTGGTGGATGAGACACTACTCAGGGAAGCAAAGAAGGATCAAGTGGGGGAACAAGCACACATTTTGGTGACAGGTATCCACGAGAGTTTTGAAGAAATATCTGAAAAGATCCTTGCAACTGACAGAGCTCGTAGAGAAATGACAGACCTTGAAACTAAGCTTTCAAGTATTGCTACACGAACTTTAAATATCCACAAACTACAGGCAGATCTTGATGCCATAAGGAAGGAAAACGACTACCTTCAATCTCAATCTTAA 1212 40.68 MEESQEILLNSLAKAGVAIPREALSVGDLTPEALVSICAHSLRIISSSESFPITLPDSMVDRFKICTDLASSVKDLGYIGDMSFHKFLYPSEEDMYRLIRFLVGKLSESSTTAVLLNTKDNNAQVMINDEKSERSSNDEEQDLHTKFEGVKLRTEEAVSNSIQYPEEDFGAHDLLKAAVEMACDEQHIDSHITQLNEQIDARKTNLAKLESKWKAIIKPLEDKKRNLEEALCANQPESQDLESILFETKQREEEISKVSREVEKVAKLATRRSYIERIKEITKNSRKQEIDIERILKETRELQLESNIIQERLHRTYAVVDETLLREAKKDQVGEQAHILVTGIHESFEEISEKILATDRARREMTDLETKLSSIATRTLNIHKLQADLDAIRKENDYLQSQS 403
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Laca7g03194 403 Coils Coil 278 298 - -
Laca7g03194 403 Pfam CCDC22 protein coiled-coil region 188 377 IPR048348 -
Laca7g03194 403 Coils Coil 382 402 - -
Laca7g03194 403 Coils Coil 192 212 - -
Laca7g03194 403 Pfam CCDC22 protein N-terminal domain 1 107 IPR048349 -
Laca7g03194 403 PANTHER JM1 PROTEIN 155 402 IPR008530 GO:0097602(PANTHER)|GO:2000060(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Laca7g03194 K23343 coiled-coil domain-containing protein 22