Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Laca7g03198 | ATGGCTGCTCAGGCTGTGGAGTCTGCAGCGGTGACGGCTCTGCGATCGGTTCTTCACCGTGTCCGGCATGCGGCGGAGAGATCTGGTCGGCATGCCGATGATGTGCGGGTGGTGGCAGTGAGCAAGACTAAACCTATCTCTCTCATCCGCCAAGTCTACGACGCAGGACACCGTTGTTTTGGGGAAAACTATGTCCAGGAATTCATCGAAAAGGCTCCTCAGCTTCCAAAGGATATCGACTGGCACTTTATTGGACATTTACAGAGCAATAAAGCAAAATCCCTACTCGCTGCTGTTCCAAATCTATCGATGGTGCAGGGTGTAGATAACGAGAAGATCGCAAATCACCTTGATCGTGCAGTTTCAAGCATTGGAAGAAAACCTTTGGCAGTTATGGTCCAAGTAAATACGAGTGGAGAGACATCAAAATCTGGGATTGAACCTTCAAGCTGTGTAGATCTTGTGAAGCATGTTAAGCTTAGTTGCCCAAATCTGGTGTTTTCTGGGTTAATGACTATTGGAATGCCAGATTATACATCGACTCCAGAGAATTTCAAGACGCTATCAAGGTGCCGAAGTGAGATCTGCAAGGAACTTGGAATGGTGGAAAATCAGTGTGAGCTGTCAATGGGCATGTCTGGGGACTTTGAACTAGCGATTGAAATGGGAAGCACAAATCTGAATAGCATGGGGAGTGACCAGATGCAAGCTTTTGGAACTGAGTTTGGGAAGAAGAAGAAGATTTAA | 747 | 46.85 | MAAQAVESAAVTALRSVLHRVRHAAERSGRHADDVRVVAVSKTKPISLIRQVYDAGHRCFGENYVQEFIEKAPQLPKDIDWHFIGHLQSNKAKSLLAAVPNLSMVQGVDNEKIANHLDRAVSSIGRKPLAVMVQVNTSGETSKSGIEPSSCVDLVKHVKLSCPNLVFSGLMTIGMPDYTSTPENFKTLSRCRSEICKELGMVENQCELSMGMSGDFELAIEMGSTNLNSMGSDQMQAFGTEFGKKKKI | 248 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Laca7g03198 | 248 | CDD | PLPDE-III-YBL036c-euk | 14 | 227 | - | - | |
| Laca7g03198 | 248 | PANTHER | PROLINE SYNTHETASE CO-TRANSCRIBED BACTERIAL HOMOLOG PROTEIN | 3 | 227 | IPR011078 | GO:0005622(PANTHER)|GO:0030170(InterPro)|GO:0030170(PANTHER) | |
| Laca7g03198 | 248 | Pfam | Alanine racemase, N-terminal domain | 19 | 219 | IPR001608 | - | |
| Laca7g03198 | 248 | NCBIfam | YggS family pyridoxal phosphate-dependent enzyme | 16 | 227 | IPR011078 | GO:0030170(InterPro) | |
| Laca7g03198 | 248 | Hamap | Pyridoxal phosphate homeostasis protein. | 12 | 236 | IPR011078 | GO:0030170(InterPro) | |
| Laca7g03198 | 248 | Gene3D | Alanine racemase | 1 | 231 | IPR029066 | - | |
| Laca7g03198 | 248 | PIRSF | YBL036c-PLPDEIII | 1 | 233 | IPR011078 | GO:0030170(InterPro) | |
| Laca7g03198 | 248 | ProSitePatterns | Uncharacterized protein family UPF0001 signature. | 81 | 95 | IPR011078 | GO:0030170(InterPro) | |
| Laca7g03198 | 248 | FunFam | Pyridoxal phosphate homeostasis protein | 2 | 247 | - | - | |
| Laca7g03198 | 248 | SUPERFAMILY | PLP-binding barrel | 10 | 226 | IPR029066 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Laca7g03198 | K06997 | PLP dependent protein |