AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Laca7g03198 ATGGCTGCTCAGGCTGTGGAGTCTGCAGCGGTGACGGCTCTGCGATCGGTTCTTCACCGTGTCCGGCATGCGGCGGAGAGATCTGGTCGGCATGCCGATGATGTGCGGGTGGTGGCAGTGAGCAAGACTAAACCTATCTCTCTCATCCGCCAAGTCTACGACGCAGGACACCGTTGTTTTGGGGAAAACTATGTCCAGGAATTCATCGAAAAGGCTCCTCAGCTTCCAAAGGATATCGACTGGCACTTTATTGGACATTTACAGAGCAATAAAGCAAAATCCCTACTCGCTGCTGTTCCAAATCTATCGATGGTGCAGGGTGTAGATAACGAGAAGATCGCAAATCACCTTGATCGTGCAGTTTCAAGCATTGGAAGAAAACCTTTGGCAGTTATGGTCCAAGTAAATACGAGTGGAGAGACATCAAAATCTGGGATTGAACCTTCAAGCTGTGTAGATCTTGTGAAGCATGTTAAGCTTAGTTGCCCAAATCTGGTGTTTTCTGGGTTAATGACTATTGGAATGCCAGATTATACATCGACTCCAGAGAATTTCAAGACGCTATCAAGGTGCCGAAGTGAGATCTGCAAGGAACTTGGAATGGTGGAAAATCAGTGTGAGCTGTCAATGGGCATGTCTGGGGACTTTGAACTAGCGATTGAAATGGGAAGCACAAATCTGAATAGCATGGGGAGTGACCAGATGCAAGCTTTTGGAACTGAGTTTGGGAAGAAGAAGAAGATTTAA 747 46.85 MAAQAVESAAVTALRSVLHRVRHAAERSGRHADDVRVVAVSKTKPISLIRQVYDAGHRCFGENYVQEFIEKAPQLPKDIDWHFIGHLQSNKAKSLLAAVPNLSMVQGVDNEKIANHLDRAVSSIGRKPLAVMVQVNTSGETSKSGIEPSSCVDLVKHVKLSCPNLVFSGLMTIGMPDYTSTPENFKTLSRCRSEICKELGMVENQCELSMGMSGDFELAIEMGSTNLNSMGSDQMQAFGTEFGKKKKI 248
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Laca7g03198 248 CDD PLPDE-III-YBL036c-euk 14 227 - -
Laca7g03198 248 PANTHER PROLINE SYNTHETASE CO-TRANSCRIBED BACTERIAL HOMOLOG PROTEIN 3 227 IPR011078 GO:0005622(PANTHER)|GO:0030170(InterPro)|GO:0030170(PANTHER)
Laca7g03198 248 Pfam Alanine racemase, N-terminal domain 19 219 IPR001608 -
Laca7g03198 248 NCBIfam YggS family pyridoxal phosphate-dependent enzyme 16 227 IPR011078 GO:0030170(InterPro)
Laca7g03198 248 Hamap Pyridoxal phosphate homeostasis protein. 12 236 IPR011078 GO:0030170(InterPro)
Laca7g03198 248 Gene3D Alanine racemase 1 231 IPR029066 -
Laca7g03198 248 PIRSF YBL036c-PLPDEIII 1 233 IPR011078 GO:0030170(InterPro)
Laca7g03198 248 ProSitePatterns Uncharacterized protein family UPF0001 signature. 81 95 IPR011078 GO:0030170(InterPro)
Laca7g03198 248 FunFam Pyridoxal phosphate homeostasis protein 2 247 - -
Laca7g03198 248 SUPERFAMILY PLP-binding barrel 10 226 IPR029066 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Laca7g03198 K06997 PLP dependent protein