Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Laca7g03221 | ATGGCACAAAGTTTCCTCCAAAACTCCATCTTCGATCTTGGACACAATTATTATCATGTTCAGACAACAGATGAATTGAACTTATTAGTTAAGGAGTTAAAGTTGATTCTCTATGGTGATGACAACTCTGAGCCTTGTGAGGAAGCATGTGCACAGTTGACTGAGCAATTCTTTAGAGAAGACATAATGCGTCTTCTCATTATCTTTCTTCCCAAGTTGAACTTGGAGGCACGTAAAGATGCAACCCAAGTTGTTGCAAGTTTGCAAAGGCAACCCTTGCCATCACGTTTCCAAGCTTCCAAATATTTAGAATCCAATCTAGATCTTGTTGATATTCTAATATCCGGTTATGAAGATCCTTTATTAGCTCTCCATTATGGAAGGATGTTAAAAGAGTGCCTACGTCATCAAGTTGTTGCTAGTTATATATTAGAACCAATTCAACTAAAGAAACTTTTTGGTTACATACAACTTCCAAGTTTCGATATTGCTGCAGATGCCACCGATACCTTCAAGGATCTATTGACTAGGCATAAGTCCACTGTATCCGAATCACTATCCAAAAACTATTCTTGGTTTTTTACAGAATTTAATGAGAAACTACTAAAATCATCAAACTATATCACTAAAAGACAAGCTGTTAAGTTATTAGGAAGCATAATGCTTGATCGTTCAAATTCTATCGTTATGAGACGCTATGTCAGTTCAAAAGACAATTTGATCATTCTAATGAATCTTCTAAGGGATACAAGTAGGAGCATCCAGATAGATGCTTTTCATGTGTTCAAGGTTTGGATACGTAAACTTATATACCTTTAA | 819 | 35.78 | MAQSFLQNSIFDLGHNYYHVQTTDELNLLVKELKLILYGDDNSEPCEEACAQLTEQFFREDIMRLLIIFLPKLNLEARKDATQVVASLQRQPLPSRFQASKYLESNLDLVDILISGYEDPLLALHYGRMLKECLRHQVVASYILEPIQLKKLFGYIQLPSFDIAADATDTFKDLLTRHKSTVSESLSKNYSWFFTEFNEKLLKSSNYITKRQAVKLLGSIMLDRSNSIVMRRYVSSKDNLIILMNLLRDTSRSIQIDAFHVFKVWIRKLIYL | 272 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Laca7g03221 | 272 | Gene3D | - | 9 | 268 | IPR011989 | - | |
| Laca7g03221 | 272 | PANTHER | CALCIUM-BINDING PROTEIN 39-RELATED | 21 | 267 | IPR013878 | GO:0035556(PANTHER)|GO:0043539(PANTHER) | |
| Laca7g03221 | 272 | Pfam | Mo25-like | 21 | 266 | IPR013878 | - | |
| Laca7g03221 | 272 | SUPERFAMILY | ARM repeat | 23 | 267 | IPR016024 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Laca7g03221 | K08272 | calcium binding protein 39 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Laca | Laca-Chr7:150491948 | Laca9g03377 | Laca-Chr9:138468981 | dispersed | |
| Laca | Laca-Chr5:188886671 | Laca7g03221 | Laca-Chr7:150491948 | wgd |