Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Laca8g01409 | ATGGAATCGAAAAAAGACAGGGGTGAAGTGAGGATTCATGAAAATTTGGATGAACTTAGCACAGATTTGGCTGATTACGTGGCAGAATTATCAGAGGCATCTGTGAAAGAACGTGGCGTTTTCGCCATTGCTTTGTCTGGAGGTTCTCTCATTAGCTTAATGAGGAATCTATGTGGAGCTCCTTATAACAAAACCGTAGATTGGTCCAAATGGTATATATTTTGGGCAGATGAACGTGTGGTTGCCAAAAATCATGTCGATAGTAACTATAAACTTGCAAAAGATCATCTTTTGTCTAAGTTACCTATTGTTCCGAGCCATGTACATTCCATCAATGATTCCCTCACAGCGGAAGAAGCTGCAACCGAATACGAGTTTGTGATCAGACAACTTGTGAGGACACGTGTCATCAACGTGTCTGACGTCAGCGACTGCCCGAAGTTTGACCTAATCCTACTTGGCATGGGCCCGGATGGACATGTGGCGTCTTTGTTCCCTAACCATTCGGTTCTTGAAGAAAAAAACGAGTGGGTGACATTCATCACCACTTCGCCTAAACCTCCGCCCGAAAGAATCACCTTCACCCTGCCCGTTATCAACTCTGCTGCCAATGTGGTGGTGGTGGTGACAGGTGGCGGAAAGGCAGAAGCTGCCAGGCTGGCGATAGATGATGTGGGACCCGAGTGTGAGGTGTTGCCAGCTAGGATGATTGAACCGGTTGTTGGGAAGTTGGTTTGGTTTTTGGATAGCCAAGCTGCTTCAAAGCTGAAGAGCTTTTCTTAA | 783 | 46.1 | MESKKDRGEVRIHENLDELSTDLADYVAELSEASVKERGVFAIALSGGSLISLMRNLCGAPYNKTVDWSKWYIFWADERVVAKNHVDSNYKLAKDHLLSKLPIVPSHVHSINDSLTAEEAATEYEFVIRQLVRTRVINVSDVSDCPKFDLILLGMGPDGHVASLFPNHSVLEEKNEWVTFITTSPKPPPERITFTLPVINSAANVVVVVTGGGKAEAARLAIDDVGPECEVLPARMIEPVVGKLVWFLDSQAASKLKSFS | 260 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Laca8g01409 | 260 | Gene3D | - | 6 | 259 | - | - | |
| Laca8g01409 | 260 | FunFam | Probable 6-phosphogluconolactonase | 5 | 257 | - | - | |
| Laca8g01409 | 260 | Coils | Coil | 16 | 36 | - | - | |
| Laca8g01409 | 260 | CDD | 6PGL | 17 | 248 | IPR005900 | GO:0005975(InterPro)|GO:0006098(InterPro)|GO:0017057(InterPro) | |
| Laca8g01409 | 260 | PANTHER | 6-PHOSPHOGLUCONOLACTONASE | 3 | 257 | IPR039104 | - | |
| Laca8g01409 | 260 | Pfam | Glucosamine-6-phosphate isomerases-6-phosphogluconolactonase | 16 | 246 | IPR006148 | GO:0005975(InterPro) | |
| Laca8g01409 | 260 | NCBIfam | 6-phosphogluconolactonase | 12 | 256 | IPR005900 | GO:0005975(InterPro)|GO:0006098(InterPro)|GO:0017057(InterPro) | |
| Laca8g01409 | 260 | SUPERFAMILY | NagB-RpiA-CoA transferase-like | 10 | 257 | IPR037171 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Laca8g01409 | K01057 | 6-phosphogluconolactonase [EC:3.1.1.31] |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 3738531 | Laca | Laca8g00127 | Laca-Chr8:3849773 | Laca8g01409 | Laca-Chr8:48423409 |