Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lomi10g01432 | ATGAGAGAAGCAAACAACACCAACGAAAACAATCACAGTAGCAACGAATCATCATCACCACCACCACCACCACCACAAGCACTCCTTGAAAGACTTAAAGATTATGGTCAAGAAGATGCTTTTGCTTTCTGGGATCAGCTCTCTTCTGACCAACAAAACTACCTTGTTCAAGAAATTGAGAGTTTAGATCTTCCAAGGATCGATCGAATGATTAGGTGTTCGTTCCAGTCCCATGGGTTACCGGCCGCGGCTATAGAGCCGGTGCCAGAGAGTTCGGTGTCAACTGTGGAAGATAGGAAACTTGAAGATAGAGAAAAATGGTGGAAAATGGGGTTAAAAGCTATTGCAGATGGGAAATTAGCTGTACTACTTTTATCCGGTGGACAGGGGACACGGCTTGGAAGTTCTGCCCCGAAAGGATGTGTTAATATTGGACTTCCATCAGGAAAGTCTCTTTTCCAACTCCAAGCTGAGCGAATTCTATGTCTTCAAAGATTAGCAGCTCAATCCATAACTGAGGGTTCTGGTAATATTGTGCCAATACATTGGTACGTAATGACCAGTCCATTTACTGATAAAAGCACACACAATTTCTTCAAGCATCACAAATATTTTGGTCTTGATGCTGATCAGGTTACTTTCTTTTCACAAGGCACAATACCTTGTGTTTCAAAGGATGGTAGATTTATCATGGAAACTCCATTCCAGGTGGCAAAAGCTCCTGACGGAAATGGAGGAGTTTATTCAGCATTGAAGTATTCAAGACTACTAGAAGATATGTCTTCAAGAGGTGTCAAATATTTGGATTGCTACGGAGTTGATAATGCTTTGGTTCGTGTTGGTGATCCTACTTTCTTGGGCTATTTTATTGATAAGGGCGTAGCATCTGCTGCTAAAGTTGTCCGTAAGGCATACCCTCAAGAGAAAGTTGGTGTATTTGTAAGACGTGGTAAAGGAGGACCTGTAACTGTAGTTGAATATAGTGAGTTGGATCAGTCGCTGGCAAGTGAAATTAACCAGGGAACGGGCCGACTTCGATATTGTTGGAGTAATGTTTGCCTCCACATGTTCACTTTGGACTTCCTGAACCAAGTTGCAAATGGTCTTGAAAAGGACAGCATATATCACCTTGCTGAGAAGAAAATCCCATCAATCCATGGACAAACGGTGGGATACAAGCTAGAACAATTCATATTTGACGCATTTCCATATGCACCTTCAACAGCACTTTTTGAGGTATTACGTGAAGAAGAATTTGCCCCTGTGAAAAATGCCAATGGGTCAAACTTTGACACTCCAGACAGTGCTCGGCTTCTGGTTCTTCGTCTGCATACACGCTGGGTGGTTGCAGCAGGTGGCTTCTTAACACATTCGGTGCCCTTATATTCAACTGGTGTTGAGGTCTCACCACTTGTTTCATACGCTGGAGAAAATCTTGAACCAATTTGCCGCGGTAGAACGTTCCATGCACCTTGTGAAATCACATTCTAG | 1491 | 42.86 | MREANNTNENNHSSNESSSPPPPPPQALLERLKDYGQEDAFAFWDQLSSDQQNYLVQEIESLDLPRIDRMIRCSFQSHGLPAAAIEPVPESSVSTVEDRKLEDREKWWKMGLKAIADGKLAVLLLSGGQGTRLGSSAPKGCVNIGLPSGKSLFQLQAERILCLQRLAAQSITEGSGNIVPIHWYVMTSPFTDKSTHNFFKHHKYFGLDADQVTFFSQGTIPCVSKDGRFIMETPFQVAKAPDGNGGVYSALKYSRLLEDMSSRGVKYLDCYGVDNALVRVGDPTFLGYFIDKGVASAAKVVRKAYPQEKVGVFVRRGKGGPVTVVEYSELDQSLASEINQGTGRLRYCWSNVCLHMFTLDFLNQVANGLEKDSIYHLAEKKIPSIHGQTVGYKLEQFIFDAFPYAPSTALFEVLREEEFAPVKNANGSNFDTPDSARLLVLRLHTRWVVAAGGFLTHSVPLYSTGVEVSPLVSYAGENLEPICRGRTFHAPCEITF | 496 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lomi10g01432 | 496 | MobiDBLite | consensus disorder prediction | 1 | 16 | - | - | |
| Lomi10g01432 | 496 | Gene3D | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 24 | 492 | IPR029044 | - | |
| Lomi10g01432 | 496 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - | |
| Lomi10g01432 | 496 | Pfam | UTP--glucose-1-phosphate uridylyltransferase | 69 | 451 | IPR002618 | GO:0070569(InterPro) | |
| Lomi10g01432 | 496 | SUPERFAMILY | Nucleotide-diphospho-sugar transferases | 27 | 494 | IPR029044 | - | |
| Lomi10g01432 | 496 | FunFam | UDP-N-acetylglucosamine diphosphorylase 2 | 22 | 492 | - | - | |
| Lomi10g01432 | 496 | PANTHER | UDP- GLUCOSE PYROPHOSPHORYLASE | 25 | 494 | IPR039741 | GO:0003977(PANTHER)|GO:0006048(PANTHER) | |
| Lomi10g01432 | 496 | CDD | UDPGlcNAc-PPase | 105 | 426 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lomi10g01432 | K00972 | UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine diphosphorylase [EC:2.7.7.23 2.7.7.83] |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 334479 | Lomi10g01432 | Lomi8g01298 | |
| 336239 | Lomi8g01298 | Lomi10g01432 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Lomi | Lomi-Chr10:12084679 | Lomi8g01298 | Lomi-Chr8:12635474 | wgd |