Gene detail

Gene Search

Species

Gene ID

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Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lomi1g00052	ATGGCTCGGTCAATGGTTGGTTATGTTACGATTCTTCTAGTGTTGATGATGGTGACGTTTGGTGAAACGGCAAGTACTCCGCCAGGGATTGCTAAAAACCCTGTCCAAGGAAGTTGCACCAACGAAGAGTTCAAAGTATGTAAAAACTTGGTGCATGTGTGTCCCAAGTTTTGTCCCGATGGTTGTACCCATAATTGTCGATCATGTAAACCTGTTTGTATCGGCTCTACTACACCATCACCACCTGTGGTAGATCCTCCCATCGTTACTCCACCACAATCCCCACCACCAACTCCTCAATCACCTCCTACTCCTATCCCTTCACCTCCTCAATCACCTCCTACTCCCACCCCTTCGCCTCCTGTATGGTATCCTACCCCACCTCCTCAACCAACGAAAGCCAAGTGCGTAAACAAAGGTTATCCACAATGTTACGCCACTGAGCATGTATGTCCTGCTTCTTGTCCTAACCAATGTGTGGTTGATTGTGTCGCATGCAAGCCAGTTTGCAATTGTGATATGCCGGGAGCAGTGTGTCAAGATCCTCGTTTTATTGGTGCTGATGGCATCACTTTCTACTTCCATGGAAAGAAAGATAAAGATTTTTGTCTTGTTTCCGACAAAAACCTCCACATCAATGGTCACTTCATTGGCAAGAGGAACAAAAACATGGGCAGAGACTTTACTTGGGTGCAATCCATTGGTGTTCTCTTCGACAACCACCAACTACAACTTGGTGCTCAAAAGACTTCCACTTGGGATGATGCCATAGACCGTATCTCCATTACATTTGACGGAGAAACCATCCTTCTCCCAGAAACCGAAGGCGCAAAATGGGAATCTTCCTCAGCATCCATCACTAGGATCCAAGACACAAACGATGTCGTTGTTGAGGTTGAGAACCTCTTCAAGATCACTGCCAAAGTGGTTCCAATCACTAAAGAAGAATCAAGAATCCATAACTATGAAATTAACGATGATGATTGTTTTGCTCATCTTGATCTTAAATTCAAATTCTTCTCTTTGAGTAACGAAGTGGACGGAGTTTTGGGACAGACTTACAAGAGCGACTACGTGAGCAAAGTGAAAATGGGAGTTCTAATGCCTGTTATGGGAGGTGATAGAAAGTTCAAGAGTGGAAATTTATTTGCTGCTGATTGTTCAGTTGCCAAATTTAAGGGAAACGATGAACAAGGTTCCCTTTTGAACTTGGAGTTGCCCAGCTTGAACTGCCAAAGTGGATTGGATGGGCGAGGTGTTGTTTGCAAGAGATAG	1275	44.47	MARSMVGYVTILLVLMMVTFGETASTPPGIAKNPVQGSCTNEEFKVCKNLVHVCPKFCPDGCTHNCRSCKPVCIGSTTPSPPVVDPPIVTPPQSPPPTPQSPPTPIPSPPQSPPTPTPSPPVWYPTPPPQPTKAKCVNKGYPQCYATEHVCPASCPNQCVVDCVACKPVCNCDMPGAVCQDPRFIGADGITFYFHGKKDKDFCLVSDKNLHINGHFIGKRNKNMGRDFTWVQSIGVLFDNHQLQLGAQKTSTWDDAIDRISITFDGETILLPETEGAKWESSSASITRIQDTNDVVVEVENLFKITAKVVPITKEESRIHNYEINDDDCFAHLDLKFKFFSLSNEVDGVLGQTYKSDYVSKVKMGVLMPVMGGDRKFKSGNLFAADCSVAKFKGNDEQGSLLNLELPSLNCQSGLDGRGVVCKR	424

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lomi1g00052	424	PRINTS	Proline rich extensin signature	79	91	-	-
	Lomi1g00052	424	PRINTS	Proline rich extensin signature	92	113	-	-
	Lomi1g00052	424	PRINTS	Proline rich extensin signature	139	156	-	-
	Lomi1g00052	424	PRINTS	Proline rich extensin signature	114	130	-	-
	Lomi1g00052	424	PANTHER	ROOT CAP DOMAIN-CONTAINING PROTEIN	112	424	-	-
	Lomi1g00052	424	Pfam	Root cap	336	392	IPR009646	-
	Lomi1g00052	424	MobiDBLite	consensus disorder prediction	84	125	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lomi1g00052	-	-

Event-related genes

Select	Gene_1	Gene_2	Event_name
	323942	Lomi2g04603	Lomi1g00052
	333535	Lomi1g00052	Lomi2g04603

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Lomi	Lomi-Chr1:558259	Lomi2g01202	Lomi-Chr2:11151857	dispersed
	Lomi	Lomi-Chr3:39962354	Lomi1g00052	Lomi-Chr1:558259	transposed
	Lomi	Lomi-Chr1:558259	Lomi2g04603	Lomi-Chr2:50998564	wgd