Gene detail

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Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lomi1g00070	ATGTCATCATTCTCCGTCAAGTTCTTCACACCGAATTCATTTCTCAGCCCAATAACAAAAACCAACCTCAGTTCCACAAGACTTTATGCAACCCCATCACAGACCACCGTCCCTGCTGTTTCTCCGGCACCGGAGGACATCAACTCCGAGAGACTAGAACCTAGAGTTGAAAAAAAAGATGGGTTTTATGTACTTAAAGAAAAGTTTAGGCAAGGAATTAATCCACAAGAAAAGGTTAAGATTGCAAGTGAACCCATGAAATTATTTATGGAAAATGGGATTGAAGATCTTGCTAAGATTTCAATTGAAGATATAGATAAATCTAAAGATACTAAAGATGATGTTGATGTTAGACTTAAATGGCTTGGTTTGTTTCATAGAAGGAAACATCAATATGGTCGATTTATGATGAGGTTGAAGCTCCCAAATGGTGTAACAACGAGTGCACAAACTCGATACTTAGCTAGTGTCATAAAGCAGTATGGAGAACAGGGTTGTGCTGATGTTACCACACGACAAAACTGGCAAATTCGAGGTGTTACGTTACCTGATGTACCCGCAATTCTAAAGGGTCTTGATGAAGTTGGCTTAACAAGTCTCCAAAGTGGTATGGACAATGTTAGGAACCCGGTTGGGAACCCGCTTGCAGGGATTGACCCACATGAAATTGTGGACACGAGACCTTATACGAATTTGTTATCGCAATTTATCACTGCCAATTCGCGAGGGAATCCTGAATTTACCAACTTGCCCAGGAAATGGAATGTGTGTGTGATTGGTTCACATGATCTTTATGAACACCCACATATTAATGATCTAGCATATATGCCAGCCACGAAGAATGGTAGGTTCGGGTTCAACTTGTTGGTTGGGGGTTTCTTTAGCCCGAAGCGATGTGAAGAGGCAATCCCTCTTGATGCGTGGGTCCCAGCTGAAGATGTTATCCCGGTTTGTGGGGCGATTCTTGAGGCCTATCGCGATCTTGGTACAAGAGGGAACAGGCAAAAGACCAGAATGATGTGGTTGATTGATGAACTTGGTGTAGAAGGGTTTCGGGCCGAAGTAGTAAAGAGAATGCCCGAACAAGCATTGGAAAGAGCATCTTCTGAAGATTCAGTTGACCCAAACTGGGAAAGAAGGGATTACTTTGGTGTAAACCCACAGAAACAAGAAGGCCTTAACTTTGTGGGCCTTCACATTCCTGTAGGCCGGGTCCAAGCTGATGACATGGATGAGTTGGCCCGGTTAGCTGACGAGTATGGCTCAGGAGAGCTTCGGCTAACTGTAGAGCAAAACATCATACTCCCAAATGTACCAAACTCAAAAGTCAAAGCTTTACTTGACGAGCCTCTTTTAAAAGAAAAGTTTTTACCCGAACCACCTATTTTGATGAAAGGGCTAGTGGCTTGCACGGGTAACCAATTTTGTGGGCAAGCCATAATTGAGACAAAAGCTCGTGCTTTGAAGGTTACAGAAGAAGTGGGGAGACTTGTTTCAGTAACCCGTCCAGTGAGAATGCACTGGACGGGGTGCCCAAACACGTGCGGGCAGGTTCAAGTAGCTGATATTGGCTTTATGGGCTGCATGACTAGGGACAAAAATGGAAAGGTTGTTGAAGGAGCTGATGTTTTCTTAGGAGGTAGAATTGGAAGTGATTCACATTTGGGGGATATCTATAAAAAGGCTGTCCCTTGTGAAGATTTGGTTCCCTTAGTAGTTGATATCTTGGTTGAAAAATTTGGTGCTGTTCCGAGAGAAAGAGAAGAGGGAGAAGAATGA	1779	43.4	MSSFSVKFFTPNSFLSPITKTNLSSTRLYATPSQTTVPAVSPAPEDINSERLEPRVEKKDGFYVLKEKFRQGINPQEKVKIASEPMKLFMENGIEDLAKISIEDIDKSKDTKDDVDVRLKWLGLFHRRKHQYGRFMMRLKLPNGVTTSAQTRYLASVIKQYGEQGCADVTTRQNWQIRGVTLPDVPAILKGLDEVGLTSLQSGMDNVRNPVGNPLAGIDPHEIVDTRPYTNLLSQFITANSRGNPEFTNLPRKWNVCVIGSHDLYEHPHINDLAYMPATKNGRFGFNLLVGGFFSPKRCEEAIPLDAWVPAEDVIPVCGAILEAYRDLGTRGNRQKTRMMWLIDELGVEGFRAEVVKRMPEQALERASSEDSVDPNWERRDYFGVNPQKQEGLNFVGLHIPVGRVQADDMDELARLADEYGSGELRLTVEQNIILPNVPNSKVKALLDEPLLKEKFLPEPPILMKGLVACTGNQFCGQAIIETKARALKVTEEVGRLVSVTRPVRMHWTGCPNTCGQVQVADIGFMGCMTRDKNGKVVEGADVFLGGRIGSDSHLGDIYKKAVPCEDLVPLVVDILVEKFGAVPREREEGEE	592

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lomi1g00070	592	Gene3D	Sulfite Reductase Hemoprotein, domain 1	196	381	IPR045854	-
	Lomi1g00070	592	Pfam	Nitrite and sulphite reductase 4Fe-4S domain	204	361	IPR006067	GO:0016491(InterPro)\|GO:0020037(InterPro)\|GO:0051536(InterPro)
	Lomi1g00070	592	SUPERFAMILY	Nitrite-Sulfite reductase N-terminal domain-like	340	476	IPR036136	GO:0016491(InterPro)
	Lomi1g00070	592	Pfam	Nitrite and sulphite reductase 4Fe-4S domain	467	576	IPR006067	GO:0016491(InterPro)\|GO:0020037(InterPro)\|GO:0051536(InterPro)
	Lomi1g00070	592	ProSitePatterns	Nitrite and sulfite reductases iron-sulfur-siroheme-binding site.	509	525	IPR006066	GO:0016491(InterPro)\|GO:0020037(InterPro)\|GO:0051536(InterPro)
	Lomi1g00070	592	Gene3D	Sulfite Reductase Hemoprotein, domain 1	461	591	IPR045854	-
	Lomi1g00070	592	PANTHER	FERREDOXIN--NITRITE REDUCTASE, CHLOROPLASTIC	4	590	IPR051329	-
	Lomi1g00070	592	Gene3D	-	72	453	-	-
	Lomi1g00070	592	PRINTS	Sirohaem Fe-binding site signature	509	527	IPR006066	GO:0016491(InterPro)\|GO:0020037(InterPro)\|GO:0051536(InterPro)
	Lomi1g00070	592	PRINTS	Sirohaem Fe-binding site signature	465	483	IPR006066	GO:0016491(InterPro)\|GO:0020037(InterPro)\|GO:0051536(InterPro)
	Lomi1g00070	592	Pfam	Nitrite-Sulfite reductase ferredoxin-like half domain	387	450	IPR005117	GO:0016491(InterPro)
	Lomi1g00070	592	Pfam	Nitrite-Sulfite reductase ferredoxin-like half domain	128	195	IPR005117	GO:0016491(InterPro)
	Lomi1g00070	592	SUPERFAMILY	Nitrite-Sulfite reductase N-terminal domain-like	52	203	IPR036136	GO:0016491(InterPro)
	Lomi1g00070	592	SUPERFAMILY	Nitrite and sulphite reductase 4Fe-4S domain-like	465	576	IPR045854	-
	Lomi1g00070	592	SUPERFAMILY	Nitrite and sulphite reductase 4Fe-4S domain-like	204	361	IPR045854	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lomi1g00070	K00366	ferredoxin-nitrite reductase [EC:1.7.7.1]

Event-related genes

Select	Gene_1	Gene_2	Event_name
	323952	Lomi2g04592	Lomi1g00070
	333525	Lomi1g00070	Lomi2g04592

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Lomi	Lomi-Chr1:712073	Lomi2g04592	Lomi-Chr2:50846215	wgd