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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lomi1g00093 ATGTCAACTACGCCGGCACTGGATCCTACACAACAACAACAACCGCCGCCATTCCCGCCGGTAATCCAAGAACAAGCATACAAATCACATTCGGTTCATGGGTCAGTGGGACCCGTAATTGGAGTCCTTGCGGTAATCATGGTATTGGGTGTGGTGGCTATAATGATAGGCAGGCTTTGTTCGGGTCGTCGGGTCATGGGTCACGTGCAATATGACTTTGAAGGTTGGGCGGAGACCAAATGCTCTACGTGTATCGATGGCAGGCCCAGCGTTCCTCCGCCGTGGCCTGAGCCGGTGCCGGTGGTGGTGGTGGAGAATAGCGGGAACAATGTCTCGTCGAGTGAAGCCGCCGCCGTAGCGGCGGAGCAACCGGATATTGCGGCACCGTCACAAGCGGAAGAAATGTCACAACATCAACAACAACAACAAGAGCAACAAAATTTACATGACTGTAGTTGA 459 53.38 MSTTPALDPTQQQQPPPFPPVIQEQAYKSHSVHGSVGPVIGVLAVIMVLGVVAIMIGRLCSGRRVMGHVQYDFEGWAETKCSTCIDGRPSVPPPWPEPVPVVVVENSGNNVSSSEAAAVAAEQPDIAAPSQAEEMSQHQQQQQEQQNLHDCS 152
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lomi1g00093 152 MobiDBLite consensus disorder prediction 130 152 - -
Lomi1g00093 152 PANTHER OS02G0708000 PROTEIN-RELATED 3 129 - -
Lomi1g00093 152 CDD TM-EGFR-like 28 58 - -
Lomi1g00093 152 MobiDBLite consensus disorder prediction 113 152 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lomi1g00093 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
118809 Lomi11g02043 Lomi1g00093
323965 Lomi2g04571 Lomi1g00093
333512 Lomi1g00093 Lomi2g04571
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Lomi Lomi-Chr1:871535 Lomi11g02043 Lomi-Chr11:28989765 wgd
Lomi Lomi-Chr1:871535 Lomi2g04571 Lomi-Chr2:50659823 wgd