Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lomi1g00098 | ATGGCAGCAGCCTCAGCCACCCTATCTCCAGTCAATTTCACTATGGTTGCACCCACCAGAACTTCTGGTAGAACCACCACCACTAAAGTGACTTACATCAAGGGTATGAACTCATTTGGTGGGCTTAAAGCCCAAAACACCGTGGCTGCATTGGGCCTTCCTGTTTGCACTGAACAACAATTTGCAAACATTGTTTGTTCATTGAAAAAACCATCATCATCATCAAATGGTGGTGCACTCACTTCCACTTGTAGTGCAGTTGCTGAGATTTTCAAAATTGCTGCTATCATGAATGGACTTACTCTTATTGGAGTTGCAGTTGGTTTTGTTCTTCTTCGAATTGAAGCGGCTGTTGAAGAAGCAGAGTAA | 369 | 43.36 | MAAASATLSPVNFTMVAPTRTSGRTTTTKVTYIKGMNSFGGLKAQNTVAALGLPVCTEQQFANIVCSLKKPSSSSNGGALTSTCSAVAEIFKIAAIMNGLTLIGVAVGFVLLRIEAAVEEAE | 122 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lomi1g00098 | 122 | Pfam | PetM family of cytochrome b6f complex subunit 7 | 89 | 115 | IPR012595 | GO:0009512(InterPro) | |
| Lomi1g00098 | 122 | Hamap | Cytochrome b6-f complex subunit 7 [petM]. | 86 | 118 | IPR012595 | GO:0009512(InterPro) | |
| Lomi1g00098 | 122 | SUPERFAMILY | PetM subunit of the cytochrome b6f complex | 87 | 119 | - | - | |
| Lomi1g00098 | 122 | PANTHER | B6F COMPLEX SUBUNIT, PUTATIVE, EXPRESSED-RELATED | 1 | 122 | IPR053333 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lomi1g00098 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 323967 | Lomi2g04563 | Lomi1g00098 | |
| 333510 | Lomi1g00098 | Lomi2g04563 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Lomi | Lomi-Chr1:926516 | Lomi2g04563 | Lomi-Chr2:50588692 | wgd |