AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lomi1g00099 ATGGGAACACTTGTTGGACATTTAGTCCCTGGTTCAGCTCTTGCTCTACTCGGCTTATGGCACATCATCAATACTATCCGAGCCTACCACCAAAAAGGCCCAACCGGTTTCAAGTCAAGCTTTTGGTACCCGCTTGTCTTGGACTACCCTTTGTTCTCATTCGCTTTCAAGCTCAATAATTATGAGCATGCTACCATGTTTCTACACTTAGTCATATATTCCAGTTTTAACCTTTTCAGCGAATTAACTCATAAATCTGACTTCTTATTTGAAGTTACTGGATTCTTAGCTGCTTCTGTTTTCGGTCAAGAGCTTTTTCTACTTCATTATCACTCAGCCGATCATGTTGGACTCGAGGGTCATTACCATTGGCTAATGCAACTTATTGTGATTGTTTCACTTTTAACAGCTTTATCTGTCACCATGTTTCCATCAAGCTTCACTTCATCGCTCGTTCTTTCTATATCTGTTGCGTTTCAGGGGTTCTGGTTCATTAACATGGGGTTCATGTTATGGGTCCCTGAGCTAGTCCCTAAAGGGTGCACCATAAGGTTAGGCCATGGTGGTGATAGTGATATGCATGGTGCGGTTGTATGTGGAAGCCACAAAGCGGTTTTAAGGGCTAAAGGATTAGCTAACTTGCAGTTCAGTTGGATACTTGCTGGGATTTTGATATTTGTGGCGTGTATATGTTTGTTTTACCCGAAAAAGATTGCTCATAGAGCTCAATCGGTTGAGTATGAACGACTTAATAGTCGAGTTGCTGAGATCCCTTTATCAGTTGGTGGATTTAAGCAAGTTAGTTACCCATAA 813 41.57 MGTLVGHLVPGSALALLGLWHIINTIRAYHQKGPTGFKSSFWYPLVLDYPLFSFAFKLNNYEHATMFLHLVIYSSFNLFSELTHKSDFLFEVTGFLAASVFGQELFLLHYHSADHVGLEGHYHWLMQLIVIVSLLTALSVTMFPSSFTSSLVLSISVAFQGFWFINMGFMLWVPELVPKGCTIRLGHGGDSDMHGAVVCGSHKAVLRAKGLANLQFSWILAGILIFVACICLFYPKKIAHRAQSVEYERLNSRVAEIPLSVGGFKQVSYP 270
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lomi1g00099 270 Pfam Family of unknown function (DUF716) 92 231 IPR006904 -
Lomi1g00099 270 PANTHER PROTEINASE INHIBITOR I4, SERPIN (DUF716)-RELATED 1 45 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lomi1g00099 - -
leaf

Event-related genes

Select Gene_1 Gene_2 Event_name
323968 Lomi2g04562 Lomi1g00099
333509 Lomi1g00099 Lomi2g04562
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Lomi Lomi-Chr1:927623 Lomi1g02747 Lomi-Chr1:39582068 dispersed
Lomi Lomi-Chr1:927623 Lomi2g04562 Lomi-Chr2:50586938 wgd