Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lomi1g00103 | ATGGATGATGTTCCAGGATCGATGGGGACTAGTGCAGGGTTCGCTCTGAGACTCGGTCAGACCATCTTCTCATCTGCTTCACTTCTCTTTATGTCGTTTGGTGATCAGTTCTACAGCTATACATCCTTCTGCTTCTTGGTGACGATTATGGGATTAGTTATTCCATGGAGTTTCACATTGGCACTGCTTGATGGATACTCTGTTCTAGTAACACGCCCAATTCGACAAAAGGGGATACTGCTTATCATAGTTATAGGGGATTGGGTGTTATCGATGCTTACATTAGGTGCCGCCTCTTCTGCCGCTAGCGTGGTGGATATCTTGCTGACAGCAGATGAATCTGTCTGCTCTCCTAAAGTCTGCAGCCGATATCTGCTTTCCACCATATTTGCTTTCTTGTCATGGTTTTTGTCTATGGCTTCTGCTCTGTTCAATCTATGGCTTCTTCCATCTTTGTGA | 459 | 45.1 | MDDVPGSMGTSAGFALRLGQTIFSSASLLFMSFGDQFYSYTSFCFLVTIMGLVIPWSFTLALLDGYSVLVTRPIRQKGILLIIVIGDWVLSMLTLGAASSAASVVDILLTADESVCSPKVCSRYLLSTIFAFLSWFLSMASALFNLWLLPSL | 152 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lomi1g00103 | 152 | PANTHER | CASP-LIKE PROTEIN 5B3 | 1 | 151 | IPR045009 | GO:0016020(PANTHER) | |
| Lomi1g00103 | 152 | Pfam | Casparian strip membrane protein domain | 8 | 137 | IPR006702 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lomi1g00103 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 323972 | Lomi2g04556 | Lomi1g00103 | |
| 333505 | Lomi1g00103 | Lomi2g04556 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Lomi | Lomi-Chr1:969733 | Lomi12g00740 | Lomi-Chr12:8348252 | wgd | |
| Lomi | Lomi-Chr1:969733 | Lomi2g04556 | Lomi-Chr2:50552378 | wgd | |
| Lomi | Lomi-Chr1:969733 | Lomi9g01376 | Lomi-Chr9:25952568 | wgd |