Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lomi1g00106 | ATGGGTATATGTGCATCAAACCAGTTCCCAAAACACCAACAAACTTTATTAATCAGTAACGTCCCATCATCAGCGACGAAAGTGATCAACTCAATCGACGGAAATTTACAAGAGTTCCGTCAACCAATCAAAGCAAGCCACGTACTCTCCCAACACCCAAACAACAGCTTCTTCCTATGCAGTTCCGATCACATGTTTGTTAACTATCACGTGCCTCACGTGCCGGAAGAAGAAGATCTCCAGCCGGGTCAGATTTATTTTCTTATGCGGGTTTCAAAATCGTGTAAACCGCTTTCGTTACAAGAACTTTGTTCGTTGGCGATAAAAGCGAGTCTAGCGATTGAAAAAAATTTAAAAATGAAAAATGGTAAGACGGAGTCGTTTAATGGACCGCGTAAAAGGAATGGGAATGCAAAGGTGGATTTTCAGCTGGCGTTAAAGCAGCTTGGGTAA | 453 | 42.16 | MGICASNQFPKHQQTLLISNVPSSATKVINSIDGNLQEFRQPIKASHVLSQHPNNSFFLCSSDHMFVNYHVPHVPEEEDLQPGQIYFLMRVSKSCKPLSLQELCSLAIKASLAIEKNLKMKNGKTESFNGPRKRNGNAKVDFQLALKQLG | 150 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lomi1g00106 | 150 | PANTHER | DUF4228 DOMAIN PROTEIN-RELATED | 23 | 123 | - | - | |
| Lomi1g00106 | 150 | Pfam | PADRE domain | 1 | 140 | IPR025322 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lomi1g00106 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 118800 | Lomi11g02033 | Lomi1g00106 | |
| 323974 | Lomi2g04553 | Lomi1g00106 | |
| 333503 | Lomi1g00106 | Lomi2g04553 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Lomi | Lomi-Chr1:978987 | Lomi2g04554 | Lomi-Chr2:50543324 | dispersed | |
| Lomi | Lomi-Chr1:978987 | Lomi11g02033 | Lomi-Chr11:28894704 | wgd | |
| Lomi | Lomi-Chr1:978987 | Lomi2g04553 | Lomi-Chr2:50540486 | wgd | |
| Lomi | Lomi-Chr1:978987 | Lomi6g00820 | Lomi-Chr6:9267018 | wgd | |
| Lomi | Lomi-Chr1:978987 | Lomi9g01375 | Lomi-Chr9:25944117 | wgd |