Gene detail

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Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lomi1g00111	ATGTTTACTAGTTTCACACCCTTTAGAGGCATGAAATCGAAAATAGTTCCTTACTATATGAACGGAACTCCATCGAGTCTTTTTTGCATCCTGCCACGAGACGATTCTTCCCGCTTTTATCCACCTGGCACCGCCCCTGTTTACATTAACGTATATGATATTTCTAGTATCAATAGTTGTATATCATGGACAGGTCTTGGTGCATTTCACACGGGCTTAGAAGTTCATGGTGTGGAATATGGTTTTGGATGTCACCAAGAATCAGAAAGCGGTGTGTTTGAAATCGAGCCTAAAAGATGTCCTGGTTTCAAGTTTAGGGAGTCGATTTTAATGGGTACCACAAAATTAACCCCGAGTCAAGTTCATAGATTCATTGAGCTGCAATCTAATAACTACTATGGTGACACATACCACTTGTTTGGGAAAAATTGCAATCATTTTTGTGAAGATATGTGTTATCAGTTAACAGGAAACAATATCCCCAAATGGGTCAACCGGCTAGCCAGATTAGGTTCATATTGTCGTTGCATACTACCAAAAGCGATAAAGGGTTCTGCTGTTAAAAATGAATCAAACATTTCAGACTATGAAAAGAAGAGTTTGAAAAGCCCGTTTAATTGTTTCACATCATTTTCGTCCCATAATAAGTTGAGGAAAGTGTCGATTACTTCATTGTATAGACATTCACTTTACAAAGGATGTCTTCCCCCATGGGACTTGCAAGTTGACTCACAAAGGCTTTGTGATGATGATGAGTAA	759	38.74	MFTSFTPFRGMKSKIVPYYMNGTPSSLFCILPRDDSSRFYPPGTAPVYINVYDISSINSCISWTGLGAFHTGLEVHGVEYGFGCHQESESGVFEIEPKRCPGFKFRESILMGTTKLTPSQVHRFIELQSNNYYGDTYHLFGKNCNHFCEDMCYQLTGNNIPKWVNRLARLGSYCRCILPKAIKGSAVKNESNISDYEKKSLKSPFNCFTSFSSHNKLRKVSITSLYRHSLYKGCLPPWDLQVDSQRLCDDDE	252

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lomi1g00111	252	ProSiteProfiles	PPPDE domain profile.	45	182	IPR008580	GO:0008233(InterPro)
	Lomi1g00111	252	SMART	DUF862-2a	45	183	IPR008580	GO:0008233(InterPro)
	Lomi1g00111	252	Gene3D	PPPDE domains	41	199	IPR042266	-
	Lomi1g00111	252	PANTHER	DESUMOYLATING ISOPEPTIDASE	44	194	IPR008580	GO:0008233(InterPro)\|GO:0016579(PANTHER)\|GO:0070646(PANTHER)\|GO:0101005(PANTHER)
	Lomi1g00111	252	Pfam	PPPDE putative peptidase domain	46	180	IPR008580	GO:0008233(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lomi1g00111	K22763	deubiquitinase DESI2 [EC:3.4.19.12]

Event-related genes

Select	Gene_1	Gene_2	Event_name
	323979	Lomi2g04548	Lomi1g00111
	333498	Lomi1g00111	Lomi2g04548

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Lomi	Lomi-Chr1:1006551	Lomi5g00176	Lomi-Chr5:2144074	dispersed
	Lomi	Lomi-Chr1:1006551	Lomi12g01628	Lomi-Chr12:24877034	wgd
	Lomi	Lomi-Chr1:1006551	Lomi2g04548	Lomi-Chr2:50511063	wgd
	Lomi	Lomi-Chr1:1006551	Lomi5g00521	Lomi-Chr5:6252843	wgd