Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lomi1g00116 | ATGGGCTCTTCTGCCAGTTATATCCTCATCTTCATGTATGCACCACTGTTTATTCAGTTTTGCAGTGCTCGGGAAATCTACGACATCCCAAGAAATGATCATGACGAAAAAAGTAATATAGAAATCTATGGAAAGAAAGAAGTTAATTACTTCGATCCTGCTCTAAATGTGTTCTTCCATGTTCAAGATTTATACTCGGGCAAAAAAATGCCAATTTATTTCGCAGTTAACGACCCTTTAACAACTCCTCGGTTATTAGCCAAAGAACATGCCGAATTAATACCATTTTCGTCGTTAAAACTTCCATTCCTTCTCGATTTTATATCGTTATCCGAGGATTCACCACAAGCAAAAGTTATGGAACAAACACTTAAACAATGTGAGCTTGAACCAACACCAGGTGAGACAAGGTTTTGTGCTAGCTCATTAGAGTCCTTACTGGACATGGCACGTGGCATATTGGGTATGGTCAAACTAAAAACATTGACTACCAAGATACATGATTTAGCAAATTCCAATCATACCCTTTTGCAAGAGTATACTTTTTTGAAGGAGCCTTTAGAGATTCATACTTCTGATATGGTGGCTTGTCATACAATGGCTTATCCTTATGCTGTTTTTTATTGTCATGGTCAAAAGGGGTATAATAGGGTTTTTGAGATTTCTTTAGGGGGTGAAAATGGAAATAGAGTTGATGCAATTGCTGTTTGCCATATGGACACTTCTACTTGGGACGCTGATCACGTGGCGTTTCATGTGCTAGGCGACCGCCCTGGCAGTTCGCCGGTGTGTCACTTTCTTCCTGCTGATAACATTGTTTGGATACCGTCGCCATAG | 837 | 39.78 | MGSSASYILIFMYAPLFIQFCSAREIYDIPRNDHDEKSNIEIYGKKEVNYFDPALNVFFHVQDLYSGKKMPIYFAVNDPLTTPRLLAKEHAELIPFSSLKLPFLLDFISLSEDSPQAKVMEQTLKQCELEPTPGETRFCASSLESLLDMARGILGMVKLKTLTTKIHDLANSNHTLLQEYTFLKEPLEIHTSDMVACHTMAYPYAVFYCHGQKGYNRVFEISLGGENGNRVDAIAVCHMDTSTWDADHVAFHVLGDRPGSSPVCHFLPADNIVWIPSP | 278 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lomi1g00116 | 278 | PANTHER | BURP DOMAIN PROTEIN USPL1-LIKE | 44 | 277 | IPR044816 | - | |
| Lomi1g00116 | 278 | SMART | BURP-2 | 56 | 277 | IPR004873 | - | |
| Lomi1g00116 | 278 | ProSiteProfiles | BURP domain profile. | 58 | 277 | IPR004873 | - | |
| Lomi1g00116 | 278 | Pfam | BURP domain | 57 | 275 | IPR004873 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lomi1g00116 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 323982 | Lomi2g04544 | Lomi1g00116 | |
| 333495 | Lomi1g00116 | Lomi2g04544 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Lomi | Lomi-Chr1:1035370 | Lomi2g04544 | Lomi-Chr2:50478109 | dispersed | |
| Lomi | Lomi-Chr1:1035370 | Lomi2g04543 | Lomi-Chr2:50459507 | wgd |