Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lomi1g00127	ATGATACGAGCGGTGATTATAATCAACGATCAAGGCAAGACTCGCCTCGTCAAATTCTACGATTATCAGCCAGTGGAGAAACAACATGAAATCATTCGGAATATATACGGAGTTTTATGCAGTAGAGCGGAGAATGTGAGCAACTTCGTTCAAGTAGATTCGACTTTTGGACTGGATACTCGACTTGTATACAAGACTTTTGCTACACTATACTTCATTGTCATATTCGATGATTCTGAAAATGAGCTTGCCATTCTAGATCTTATGCAAGTATTTGTGGAGACATTGGACAAGTGTTTCAGTAATGTGTGTGAGCTTGACATTGTGTTCAATTTCAACAAGGTGCATACCATCCTCGATGAGATTATTTTGGGAGGTCAAGTTGTCGAAATGAGTTCTTCTGAAGTTGTGAAAGCAGTAGACGAGATATCTTGGCTTGAGAAGAACCCAAATTCAATCCTTCAAGTTCCAAAATCTATATCTGGTTGGCAGAGACGATAA	501	39.12	MIRAVIIINDQGKTRLVKFYDYQPVEKQHEIIRNIYGVLCSRAENVSNFVQVDSTFGLDTRLVYKTFATLYFIVIFDDSENELAILDLMQVFVETLDKCFSNVCELDIVFNFNKVHTILDEIILGGQVVEMSSSEVVKAVDEISWLEKNPNSILQVPKSISGWQRR	166

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lomi1g00127	166	Gene3D	-	1	159	-	-
	Lomi1g00127	166	PANTHER	ADAPTOR COMPLEXES SMALL SUBUNIT FAMILY	2	144	IPR016635	GO:0015031(InterPro)\|GO:0016192(PANTHER)\|GO:0043231(PANTHER)
	Lomi1g00127	166	FunFam	AP complex subunit sigma	1	156	-	-
	Lomi1g00127	166	SUPERFAMILY	SNARE-like	1	144	IPR011012	-
	Lomi1g00127	166	PIRSF	AP-complex-sigma	1	155	IPR016635	GO:0015031(InterPro)
	Lomi1g00127	166	Pfam	Clathrin adaptor complex small chain	1	143	IPR022775	-
	Lomi1g00127	166	ProSitePatterns	Clathrin adaptor complexes small chain signature.	62	72	IPR000804	GO:0006886(InterPro)\|GO:0016192(InterPro)\|GO:0030117(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lomi1g00127	K12399	AP-3 complex subunit sigma

Event-related genes

Select	Gene_1	Gene_2	Event_name
	323986	Lomi2g04536	Lomi1g00127
	333491	Lomi1g00127	Lomi2g04536

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Lomi	Lomi-Chr1:1116794	Lomi6g00985	Lomi-Chr6:11086596	dispersed
	Lomi	Lomi-Chr1:1116794	Lomi2g04536	Lomi-Chr2:50407441	wgd