Gene detail

Gene Search

Species

Gene ID

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Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lomi1g00144	ATGGGGTCTGCCTGTTGTGTTGCTGCCAAAGATAGAACTATAACAGATCGATCTGGTAGTGATGTTATGACAAGAAATGATCGGTATTCGCCGTCATGGAGCTTTCGCTGGGATAATCGAGGGCGTGTAGCAGGTGAAGAGTCATCTGTGAATTGCTTTTCTGATAGTGCTGGTATGAATGATAGGTTGGACAATAAATCTCATACAACTGTAGAAACCGCAAATGCAACAGAAGGCAGTCCATTGGAAAGTTCAGGAAGCCTCACTTGGCATAAGTCTTCGCTTTCTGATGAAAATGGGGTTCCTCAGTCAGATCCAGTACATTTTAAGAATCTTTGTGAGGGGAAGGAGTCAAGGGGAACTACTGTATCTTTGGAACTGTCTCCCACCAAAATGTCAACACGAACACACTCAATTTCATCCTTTTCGGCATCTCCTTTATCTTCTTCCCGGAGTCAACTCATGCCCCTCTCAAGTTTGACCCCATCAAGGTGGCCCCGTCGCTCACCTGGTCACCATCTACTACGCCAAGTATCTGATAGCCGAATCCGAGGCATGATGTCACCCAACTTTTCAATATCTGAAGAGGGTTCACCTTTTATGTACCCTGGGTGGAGCAATAAATCAAACACAGGGTCTCATGGTGGATCTTCAGATGGTTGGTCTAATAGAGATAGATGGTCTTTTGATAGCGAGTCTTTCAGTTTTAGTCGTGATAGAGTTAGCCGATCTAGTGGCAGAGTTTCTTCTTCTCCAGCCATTGAGATTCAGACATGTGGTGTTTGCTTTAAGCTTTTAACTGAAAGATCCTCTTGGAGCAGTCAAAAAATTGTGGCCACCAATGGGCTTCCAGCTGTTGCGGTTCTGATTTGTGGGCATGTTTACCATGCAGAGTGTTTAGAGAATATGACAACGGAGGTCAACAAATATGATCCTGCTTGCCCTATTTGTACTTTGGGGGCAAAAAAGGTTCTCAAGCTGTCAGAAAAGGCAATGGGAGAATTGGATTTAAAGGGTAAATTCGGCAAGAAATCAAGGAATCGGGTGGTGGATGGTGGTGATTCGGTTCTGTTTGATCGTTTTACGAGTGGTGGAGGTCCAAGGATGGGTTCAAGTTCAAGCATGAAGACCTCCACAAGTACATCAAAGCCGTTTTTAAGGAGACACTTTTCTTTTGGCAACAAACCGAACAAATCTTTGCCAGAAAACAGTTCTAAGAAAAAGAGATTTTTCTGGTCAAAATCAAGCAAGGAGTGA	1257	43.91	MGSACCVAAKDRTITDRSGSDVMTRNDRYSPSWSFRWDNRGRVAGEESSVNCFSDSAGMNDRLDNKSHTTVETANATEGSPLESSGSLTWHKSSLSDENGVPQSDPVHFKNLCEGKESRGTTVSLELSPTKMSTRTHSISSFSASPLSSSRSQLMPLSSLTPSRWPRRSPGHHLLRQVSDSRIRGMMSPNFSISEEGSPFMYPGWSNKSNTGSHGGSSDGWSNRDRWSFDSESFSFSRDRVSRSSGRVSSSPAIEIQTCGVCFKLLTERSSWSSQKIVATNGLPAVAVLICGHVYHAECLENMTTEVNKYDPACPICTLGAKKVLKLSEKAMGELDLKGKFGKKSRNRVVDGGDSVLFDRFTSGGGPRMGSSSSMKTSTSTSKPFLRRHFSFGNKPNKSLPENSSKKKRFFWSKSSKE	418

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lomi1g00144	418	MobiDBLite	consensus disorder prediction	69	101	-	-
	Lomi1g00144	418	MobiDBLite	consensus disorder prediction	130	165	-	-
	Lomi1g00144	418	MobiDBLite	consensus disorder prediction	130	171	-	-
	Lomi1g00144	418	MobiDBLite	consensus disorder prediction	362	418	-	-
	Lomi1g00144	418	ProSiteProfiles	Zinc finger RING-type profile.	259	318	IPR001841	-
	Lomi1g00144	418	PANTHER	EXPRESSED PROTEIN	1	323	-	-
	Lomi1g00144	418	MobiDBLite	consensus disorder prediction	55	106	-	-
	Lomi1g00144	418	Gene3D	Zinc-RING finger domain, C3HC4 (zinc finger)	241	319	IPR013083	-
	Lomi1g00144	418	SUPERFAMILY	RING-U-box	252	319	-	-
	Lomi1g00144	418	SMART	ring-2	259	317	IPR001841	-
	Lomi1g00144	418	MobiDBLite	consensus disorder prediction	366	387	-	-
	Lomi1g00144	418	MobiDBLite	consensus disorder prediction	401	418	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lomi1g00144	-	-

Event-related genes

Select	Gene_1	Gene_2	Event_name
	121153	Lomi1g00144	Lomi3g00835
	323993	Lomi2g04515	Lomi1g00144
	333484	Lomi1g00144	Lomi2g04515

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Lomi	Lomi-Chr11:33123764	Lomi1g00144	Lomi-Chr1:1257804	dispersed
	Lomi	Lomi-Chr1:1257804	Lomi3g01816	Lomi-Chr3:15424100	dispersed
	Lomi	Lomi-Chr1:1257804	Lomi2g04515	Lomi-Chr2:50241361	wgd
	Lomi	Lomi-Chr1:1257804	Lomi3g00835	Lomi-Chr3:6767765	wgd