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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lomi1g00153 ATGGCGAACAAATCTATTGTTATGGCTTCATCATTGACCGGAGACGCTTTTGAATCTGTCGACGTTGTTTCCGACTCCGATTCGTGGCAGGTTATCGATCCTTCCGATTCTGACGACGAAAACTACTCTTACGATGACGTCACCACCGACGGAGATGACGTCACCGCGGACGAAGACGATGAAGTTGTGCCGGATGTTGACGATCTCCTTCAACATCCGTACGGATCTCCGTCGTCTGATATATCTATGCAATCTGTTGCTGATGAAATCAGTCATCACTGTCAGGAACTTAACGTTGCGTATGAAATCAATCAAAACCGTCAGATGATCGTTGCAGACGGTTTGATCAACAGTAGAGATGATCGATGCGATGAGGATGAAAATGAAGATGAGAGTGAAGATGAGGAAGAAGATGATGATGATTCGGAATTGGATGACGAACTGGTGCCAAAATGGTTGAGTAATAAGTTCGAGAGGCAAAGAATGAGGAAATTGGGGAAGAGAGCGTATCCGAAGATGAGGAAATCGAAACGATTGGTTAATCAGTACAATAAGCCTGGATGTGTTCATGGAAAGCATGGATTAGGATTGAAGCATAATCTCATCTGGTAA 612 44.12 MANKSIVMASSLTGDAFESVDVVSDSDSWQVIDPSDSDDENYSYDDVTTDGDDVTADEDDEVVPDVDDLLQHPYGSPSSDISMQSVADEISHHCQELNVAYEINQNRQMIVADGLINSRDDRCDEDENEDESEDEEEDDDDSELDDELVPKWLSNKFERQRMRKLGKRAYPKMRKSKRLVNQYNKPGCVHGKHGLGLKHNLIW 203
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lomi1g00153 203 PANTHER VID27-LIKE PROTEIN 1 200 - -
Lomi1g00153 203 MobiDBLite consensus disorder prediction 22 59 - -
Lomi1g00153 203 MobiDBLite consensus disorder prediction 32 59 - -
Lomi1g00153 203 MobiDBLite consensus disorder prediction 123 146 - -
Lomi1g00153 203 MobiDBLite consensus disorder prediction 116 148 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lomi1g00153 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
323999 Lomi2g04509 Lomi1g00153
333478 Lomi1g00153 Lomi2g04509
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Lomi Lomi-Chr1:1349208 Lomi2g04509 Lomi-Chr2:50172343 wgd