Gene detail

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Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lomi1g00171	ATGAAACAATGGGGTATGAAAACAACATTTTTGATATTATTGTTAATAGCAATTGCACAAAAGATTAATGGTGAAGACCCTTATAGATTTTTTAACTGGAATGTTACTTATGGTGACATCTATCCTCTTGGAGTTAAACAACAGGGGATATTAATAAACGGGCAGTTTCCCGGGCCACAAATTGATTCGGTTACTAATGATAATGTCATCGTTAGTATTTACAATAGCTTGGATGAACCATTCCTCCTTACTTGGAATGGGATACAACAAAGGAGGAATTCATGGCAAGATGGTGTTTATGGCACAAATTGCCCAATTCCACCTGGTCAGAATTTCACCTACATTCTTCAAGTAAAAGATCAAATCGGAAGCTTCTTTTACTTTCCGTCGCTTGCATTTCATCGGGCTGCTGGAGGTTATGGTGCAATTACGATCTCCAGCCGGCCTATGATCCCGGTGCCTTTTCCTCCACCTGCTGGAGACTTCACCATTCTGGCTGGTGATTGGTTCAAGCAAAATCACACTGATTTGAAAGCGATCTTAGATGGTGGACATGATCTTCCATTCCCAGATGGTCTTCTCATCAATGGTCGTGGATCTAACGGATTCACATTCAACGTTGATCAAGGTAAAACTTATAGGTTGAGGATATCGAATGTGGGGCTTACGACATCAATCAATTTTAGAATCCAAGGCCATAAAATGCTGCTAGTAGAGACTGAAGGGACTCATACTCTACAGAACACATACGCTTCTCTTGATATCCATTTGGGCCAATCCTACTCCGTTTTGGTCACTGCTGATCAACCACCACAAAATTACTACATGGTTGTCTCAACCCGATTCACTTCTCAAATCCTCACTGCAACCTCCATTCTTCGTTATACCAACTCTCCAGGAACTTTTCCAGCTCCTCCACCTGGTGGCCCGACTATCCAAATCGACTGGTCATTAAATCAAGCCAGATCTATTAGGCAAAATTTGACGGCAAGTGGACCGAGGCCCAACCCACAAGGCTCGTACCATTATGGAATGGTTAACTTCACAAGAACCATCAGGCTCGCGAACTCTGCTCCTGTCATAAATGGCAAGCAGAGGTATGCAGTCAACAGCGTCTCCTTTATACCTGCAGACACTCCTTTGAAGATTGCTGATTATTTCAAGATCTCCGGTGTCTTTTCACTTGGCACGATATCTGACAGCCCCAACGGGGGTGGCGGGTACTTACAAACTTCAGTCATGGCTGCTGATTTTAGAGGGTTTGCAGAGATTGTGTTTGAGAATTCAGAAGATACTGTGCAGTCATGGCACATTGATGGCCACTTCTTCTTTGTTGTTGGGATGGATGGAGGACCGTGGTCGGCTGATAGCAGAGCGAGTTACAATCTAAGAGATGGGATTTCTCGGTCAACGGTTCAGGTATATCCGAAATCATGGACTGCACTGTATGTGCCACTAGACAATGTGGGGATGTGGAACATTCGATCTCAGAACTGGGCTCGACAATATTTAGGTCAACAATTCTACCTTCGAGTTTACTCACCGGTGAATTCATGGAGAGATGAGTACCCGATCCCAAAGAATGCGATTACTTGTGGCCGAGCAAGTGGTCGCAAAACACGTCCTTTGTAA	1632	43.93	MKQWGMKTTFLILLLIAIAQKINGEDPYRFFNWNVTYGDIYPLGVKQQGILINGQFPGPQIDSVTNDNVIVSIYNSLDEPFLLTWNGIQQRRNSWQDGVYGTNCPIPPGQNFTYILQVKDQIGSFFYFPSLAFHRAAGGYGAITISSRPMIPVPFPPPAGDFTILAGDWFKQNHTDLKAILDGGHDLPFPDGLLINGRGSNGFTFNVDQGKTYRLRISNVGLTTSINFRIQGHKMLLVETEGTHTLQNTYASLDIHLGQSYSVLVTADQPPQNYYMVVSTRFTSQILTATSILRYTNSPGTFPAPPPGGPTIQIDWSLNQARSIRQNLTASGPRPNPQGSYHYGMVNFTRTIRLANSAPVINGKQRYAVNSVSFIPADTPLKIADYFKISGVFSLGTISDSPNGGGGYLQTSVMAADFRGFAEIVFENSEDTVQSWHIDGHFFFVVGMDGGPWSADSRASYNLRDGISRSTVQVYPKSWTALYVPLDNVGMWNIRSQNWARQYLGQQFYLRVYSPVNSWRDEYPIPKNAITCGRASGRKTRPL	543

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lomi1g00171	543	FunFam	Monocopper oxidase-like protein	159	333	-	-
	Lomi1g00171	543	FunFam	Monocopper oxidase-like protein	345	542	-	-
	Lomi1g00171	543	SUPERFAMILY	Cupredoxins	25	175	IPR008972	-
	Lomi1g00171	543	Pfam	Multicopper oxidase	34	148	IPR011707	GO:0005507(InterPro)
	Lomi1g00171	543	SUPERFAMILY	Cupredoxins	345	534	IPR008972	-
	Lomi1g00171	543	SUPERFAMILY	Cupredoxins	155	335	IPR008972	-
	Lomi1g00171	543	Pfam	Multicopper oxidase	161	297	IPR001117	-
	Lomi1g00171	543	Pfam	Multicopper oxidase	378	515	IPR011706	GO:0005507(InterPro)\|GO:0016491(InterPro)
	Lomi1g00171	543	CDD	CuRO-1-AAO-like-1	30	145	IPR034273	GO:0005507(InterPro)
	Lomi1g00171	543	Gene3D	-	344	540	IPR008972	-
	Lomi1g00171	543	Gene3D	-	14	147	IPR008972	-
	Lomi1g00171	543	PANTHER	MULTI-COPPER OXIDASE	29	509	IPR045087	GO:0016491(PANTHER)
	Lomi1g00171	543	Gene3D	-	159	334	IPR008972	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lomi1g00171	K19791	iron transport multicopper oxidase

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Lomi	Lomi-Chr12:762602	Lomi1g00171	Lomi-Chr1:1535431	dispersed
	Lomi	Lomi-Chr1:1535431	Lomi1g02522	Lomi-Chr1:37340737	dispersed
	Lomi	Lomi-Chr1:1535431	Lomi11g02000	Lomi-Chr11:28525386	wgd
	Lomi	Lomi-Chr1:1535431	Lomi2g01835	Lomi-Chr2:16998064	wgd