Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lomi1g00179 | ATGGACTTTGATGCACCAACGGATCTAATCAATAAATCGCAGATCGGATTCAGACTACTCGCCGGACTATCATCATTCAACCCTAACGACACCACTCTACCGTCTCTTCCCACCGTTGTGGCATCTATCTCCGCCGTAGACCCATCGCCGTCGAACCTGAGATGCAAATTCTGTAAAGGAAAGCTTTTGAGAGACTTACAGTCACTGATTTGTATTTACTGTGGTGAATTCCAGAAGAATGATGTTCATCCTGATCCTATTGCTTTCAGTTCCACCATTGGCTATAGCTGGTTACTTCAATCATTGAACTTTAATGGATCAGAAAGAGTTGGGTCGTTGGCTGAAGGAATCGGTCTAAATGGAGCGCAGAGCCCTGCAGAAGATGAAGCAACTTTGTCTGAGCTCCTAGATTTGAAGATTACATGGCGGGACCTGCCTAAAAGATCCAGGAATCTCAAGACCTCTGAACGTAACAGTTCTTTGAATCTGGATACAGCCGATGTGGATGATTTCTTTATAGAGTCAAAGAGGAATATTGTGTCTGATGTACGTGAAGAACTACCAGTTGCCAACAAAATTGAACAGAATAAGGCCTTTGAGGTTCAAGAGAATCATAATGTTTTGCCATCTGAGACACCTGTCACTTCCCCAATTGATGTGGGTGATGCTTCATCTGATTGGAATGCAGAATTTCAATTTCCAGATACCAAAATGGAGAATGAGATTCCCAAATCAGCTGAGCCTTTTGTAGGTTCCAAAGCTGATATGTCTTTCCAAACGGATTCAATTTCTGGCCAGAAGGAAAGCTTCGGTAACAAAAAACTGAATGATGATTCAGATTTGTTTCAAGATAACCTTTTTGCCAACATGAGCTCTCCAACTTTTCAGCAGGCTGAGAAATTGGAATCAGTCGCTAAAGCAGATGCTGGGTTATCGGGTCATGTAAATGATCTTAATTCAACAGATGCAGATGAAGACTGGTTTGGTGATGGTAATTGGCAGAAAAGTGTTGTTAACAATAGTACCATCTCTCAGCAGGCTGATCAGTTAGATTTGTTTGACAATGTAAATGATGAATCTTCTCGCGATAATCAAAATGATTCATCAACAGATTGGTTTGAAAGTACTAACTGGCAGAAAAGTGGTGTCGAAAACATTGCTTCGATGCAGGCTGATCAGTTAGACTTGTTTGACAAAGTAAATGATGGATCTTCACAGGATAATCAAAGAGATTCAACTACAGATTGGTTTGGGAATAGTGACTGGCAGAAAAGTGGTGCCGAAAACACTGCTGTCTCTCAGCAGGTTGATCAGTTAGACTTGTTTGACAAAGTAAATGATGTGTCTTCACAGGACAATCAAAATGATTCATCTACAGATTGGTTTGGAAATAGTAGCTTCCATAAAAGTACTGCTAACAACACAGCAACCATTAAGAATGATAATTTATTTGATAGTAAACCGCAGATTGATCCAATCTCTTCATCATCATTGGTTAATGACTTAATGGAGTCTGAAAAATCAGATCTTGATAATTCAGAGTCTACTGACTGGTTTCAAAATAGTCAATGGCCAATTGGTGATTCTACTTCCACCAATATTGTGGCCAGCAAAGATGATGATGACGATGTTGGGTTTGATGAATGGAATGATTTCACAAGCTCAACTGATAATTCTTGGAAACAAAGTAATGAGAATAATGCTGCTGGCGAAAAGACGTCGGAATCATATTTGTTCCCCTCAACAGCTGATCCACAGGAAGTCAATTTTGGCAACTTCTTCCAGTCAGATCCATTTTCTAGTTCATCTAGTAATAAAGATTCAAAAGATACTCATGCTGTGTATGATATCTTTTCAGAAGTATCTACAACAAGCAGGAATGCCAATGCTGAAGCTGGAAATAGTGCTGATGGACCAAAGAATGATGAAATTACTCTCAATGCAACTACAAGTCCGAAGAATGATGTACAAATGCTGTTGTCACAGATGCATGACCTGTCTTTCATGCTCAAGAGCGAGCTTTCAATTCCCCCAAAGCCAAATGATATTGGCCCTTCTCACAGGTAA | 2067 | 40.01 | MDFDAPTDLINKSQIGFRLLAGLSSFNPNDTTLPSLPTVVASISAVDPSPSNLRCKFCKGKLLRDLQSLICIYCGEFQKNDVHPDPIAFSSTIGYSWLLQSLNFNGSERVGSLAEGIGLNGAQSPAEDEATLSELLDLKITWRDLPKRSRNLKTSERNSSLNLDTADVDDFFIESKRNIVSDVREELPVANKIEQNKAFEVQENHNVLPSETPVTSPIDVGDASSDWNAEFQFPDTKMENEIPKSAEPFVGSKADMSFQTDSISGQKESFGNKKLNDDSDLFQDNLFANMSSPTFQQAEKLESVAKADAGLSGHVNDLNSTDADEDWFGDGNWQKSVVNNSTISQQADQLDLFDNVNDESSRDNQNDSSTDWFESTNWQKSGVENIASMQADQLDLFDKVNDGSSQDNQRDSTTDWFGNSDWQKSGAENTAVSQQVDQLDLFDKVNDVSSQDNQNDSSTDWFGNSSFHKSTANNTATIKNDNLFDSKPQIDPISSSSLVNDLMESEKSDLDNSESTDWFQNSQWPIGDSTSTNIVASKDDDDDVGFDEWNDFTSSTDNSWKQSNENNAAGEKTSESYLFPSTADPQEVNFGNFFQSDPFSSSSSNKDSKDTHAVYDIFSEVSTTSRNANAEAGNSADGPKNDEITLNATTSPKNDVQMLLSQMHDLSFMLKSELSIPPKPNDIGPSHR | 688 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lomi1g00179 | 688 | PANTHER | DENTIN SIALOPHOSPHOPROTEIN-RELATED | 505 | 682 | - | - | |
| Lomi1g00179 | 688 | MobiDBLite | consensus disorder prediction | 514 | 534 | - | - | |
| Lomi1g00179 | 688 | MobiDBLite | consensus disorder prediction | 549 | 573 | - | - | |
| Lomi1g00179 | 688 | MobiDBLite | consensus disorder prediction | 625 | 650 | - | - | |
| Lomi1g00179 | 688 | MobiDBLite | consensus disorder prediction | 399 | 429 | - | - | |
| Lomi1g00179 | 688 | MobiDBLite | consensus disorder prediction | 504 | 573 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lomi1g00179 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 121164 | Lomi1g00179 | Lomi5g02199 | |
| 324010 | Lomi2g04488 | Lomi1g00179 | |
| 333467 | Lomi1g00179 | Lomi2g04488 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Lomi | Lomi-Chr1:1608315 | Lomi2g04488 | Lomi-Chr2:49945431 | wgd | |
| Lomi | Lomi-Chr1:1608315 | Lomi5g02199 | Lomi-Chr5:32447959 | wgd |