Gene detail

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Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lomi1g00182	ATGGCTCAAACCCTAAGCCCTAGTCGTACACCAGGCCATAAACAAAGAGCACCTGTCCTGTCACCGGACCGGCCGTTATTTCTCGGCTCAAATGATGACAAAATGGAGCGTGCTCAAGCACGCGCCGCACGTGCTGCAGCAATTCGTAGGAAACCTGTTGCGATAAATCAAGCAACGGATGCTTCTCCAACCGATCCATGTCTCGGTCAAGAACAGATTATGGAATTGTTCCAGAATTGCATCAAATTAGCCAGTGAAAATAAAATTAATCAGAAGAACACGTGGGAGCTGAATTTGATCGATCATCTTTGCGATATCATTAAAGTCGAAGAAGAGAATGATGTTGAGACTAATTTTCAGAAGGCAAGCTGCACCCTTGAAGCTGGAGTTAGAATATATTCAATGAGGGTAGATTCAGTCCATTCTGAGGCATATAAGGTTCTTGGAGGAATTAGTCGAGTTGCACAGGATTCTGAACAAGACAGTGTAGAGGAAGGCAACACTGACAACATGCAAGTTGAAGGCACTTCGAGGAAGCAGAAAGAACAAAAGTTGTCTCCTTTAACAACATTGGAATCATCCTTTGAGGCTCTTAATGTGAAGAAGTTTGATGTTGCATTTGCTGTGGATCCTCTATATCATCAGACAACTGCACAATTTGATGAAGGCGGATCAAAAGGTCTCTTGCTGAATAACCTTGGAGTGTATGGTGGATGCCGAATGGTTTTTGACTCACTTGAAGTGCCTGGGAAGTGCATGTCATGCTCAAGTGACCATGATAAAATGGATACAATTGATATTTCTCATGCCAGAGACTGTATTGAACAAATGGTATCAAACTTCTCAAAGAAACTTGAAATCGCACCAACTCTCAAGCATATAGTCAATCTGTTTGACGAAGATAATAGAAGACCAGCATATACCTTTTCTTCCTGCCAAAGGTCTGTAGAACCAGATTGTGAAGCTTATGATGACAACGGATTTATTGGTGATGGACATGATAACTCAGAAACCTGGGACTTCATTAATGACAACCAGACAAGCCTGAATGATGAGGGCACCTATGAGGGAGAAGAGGAGCTCTTTGTTCCAGTTCATCATGAGGATAACGAGCCATATGTTTCTCATGATGGTGATGTAGATGACAAATATCAGACAGTTGACAGCTTTCTCTTCCTAAGCCTTGGTTTAACTGGAAGACATAATGCCTGGGCAGGCCCTGATCACTGGAAGTATAGGAAGACTAAAGGTCCAGAAGGTCCTGGGAAGGAAAATGGGTCACCATTAATGCCTAAAAAACAGAGGAATAAGAAACAAGCTGAACCCGATATAGAATTTATGAAAGCTTTGGACTTGGAAACTGACATGGGTAATATGTTTGCTCTGCCTAAAAATGCTAAAACATTATTGTTGCCTGCGAATAGAGAACCCTGTAACACAACACTTCCGGAAGATTGCCATTATCAACCAGAGGAGCTTGTCAAGCTATTTCTTCTTCCAAATATTATGTGCCTTGGGAAGAGAGGAAGGAGGTGTTCTGATGAACCTGCTCAAGAAGGAGAAGGGAATAATGAAATGTATCCATCTTGGGATGATGAAGGTGGTCAATGTGATGATGGAAATGCTTATAGTGATGTTGAGGACTCTACTACACTTGTTTCTCAACCCCGACAGGTAAATAAGGTTGAAGTCGAATATGATAAAACATCTAAACAAGTTGATGTTCAGGCGCTCAAAGAGACTCTTTGGTCATCAATGCAAGAAACACATGAGACGAAGACATTGTCTTTTAAGCACATATTGACATCTTTTCCACCCGATAAGAAACCGGCTGCTGCATCAACTGACATTATCTCCCCACACCTGTGTTTTATATGCGTGTTACATTTGGCTAATGAACATGGATTGAGCATCCATGGATGTGTCGACTTGGATGACCTCACAATACACCTTCCATGA	1959	41.91	MAQTLSPSRTPGHKQRAPVLSPDRPLFLGSNDDKMERAQARAARAAAIRRKPVAINQATDASPTDPCLGQEQIMELFQNCIKLASENKINQKNTWELNLIDHLCDIIKVEEENDVETNFQKASCTLEAGVRIYSMRVDSVHSEAYKVLGGISRVAQDSEQDSVEEGNTDNMQVEGTSRKQKEQKLSPLTTLESSFEALNVKKFDVAFAVDPLYHQTTAQFDEGGSKGLLLNNLGVYGGCRMVFDSLEVPGKCMSCSSDHDKMDTIDISHARDCIEQMVSNFSKKLEIAPTLKHIVNLFDEDNRRPAYTFSSCQRSVEPDCEAYDDNGFIGDGHDNSETWDFINDNQTSLNDEGTYEGEEELFVPVHHEDNEPYVSHDGDVDDKYQTVDSFLFLSLGLTGRHNAWAGPDHWKYRKTKGPEGPGKENGSPLMPKKQRNKKQAEPDIEFMKALDLETDMGNMFALPKNAKTLLLPANREPCNTTLPEDCHYQPEELVKLFLLPNIMCLGKRGRRCSDEPAQEGEGNNEMYPSWDDEGGQCDDGNAYSDVEDSTTLVSQPRQVNKVEVEYDKTSKQVDVQALKETLWSSMQETHETKTLSFKHILTSFPPDKKPAAASTDIISPHLCFICVLHLANEHGLSIHGCVDLDDLTIHLP	652

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lomi1g00182	652	PIRSF	Condensin-H	5	550	IPR022816	GO:0000796(InterPro)\|GO:0007076(InterPro)
	Lomi1g00182	652	PIRSF	Condensin-H	585	652	IPR022816	GO:0000796(InterPro)\|GO:0007076(InterPro)
	Lomi1g00182	652	PIRSF	Condensin-H	533	594	IPR022816	GO:0000796(InterPro)\|GO:0007076(InterPro)
	Lomi1g00182	652	MobiDBLite	consensus disorder prediction	409	440	-	-
	Lomi1g00182	652	Pfam	Condensin complex subunit 2	24	522	IPR022816	GO:0000796(InterPro)\|GO:0007076(InterPro)
	Lomi1g00182	652	Pfam	Condensin complex subunit 2	544	649	IPR022816	GO:0000796(InterPro)\|GO:0007076(InterPro)
	Lomi1g00182	652	MobiDBLite	consensus disorder prediction	156	185	-	-
	Lomi1g00182	652	MobiDBLite	consensus disorder prediction	1	30	-	-
	Lomi1g00182	652	PANTHER	CONDENSIN COMPLEX SUBUNIT 2	15	651	IPR022816	GO:0000796(InterPro)\|GO:0000799(PANTHER)\|GO:0003682(PANTHER)\|GO:0007076(InterPro)\|GO:0007076(PANTHER)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lomi1g00182	K06676	condensin complex subunit 2

Event-related genes

Select	Gene_1	Gene_2	Event_name
	118769	Lomi11g01996	Lomi1g00182
	324012	Lomi2g04486	Lomi1g00182
	333465	Lomi1g00182	Lomi2g04486

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Lomi	Lomi-Chr1:1634375	Lomi11g01996	Lomi-Chr11:28460973	wgd
	Lomi	Lomi-Chr1:1634375	Lomi2g04486	Lomi-Chr2:49932142	wgd
	Lomi	Lomi-Chr1:1634375	Lomi5g02197	Lomi-Chr5:32441052	wgd