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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lomi1g00187	ATGAACGAGTCAACCACCGAGTCAAGCTCACCACCGTTGCCGAGTCTCAAAGAGGTTGAGATGATCATAGGATACAAATTCAAAAACGAAGAATTATTGACAGAAGCTTTTACTCATCATTCTTACAAAAATGACGATTGTCAATCTTACGAGCGACTTGAGTACCTTGGAGACTCGGTTTTGAACCTTATGATAGCCAAAGAACATTATTTCTTGTACCCGAAGATGAAAACTGGGGAGTTGACTCAACTTCGTGCTGCCAATGTGGATACTGAAGCGTTGGCTCGTGTTGCTTTTAAGCATGGCTTACATAGGTTTCTCAGACACCAAGATCCTTTACTCCAAGGACGGGTACAAGAACTTATAGAAGGAATTAAAGAGTATCCATTACATTCTCATGGTTTGATCAATTCACCTAAGATACTTGCAGATATTGTTGAGTCGGTAGTTGGTGCAGTCTATGTTGATACTAATTTATCGATTGATGCTACATGGGAGGTGGTGAAGAATTTGTTACAACCTTCGATTACGCCAGAGAACCTTAACTTAAACCCTGTAACGAAGTTGAATCAAACATGCCAAAAGATGGGGATCAAATTAGAGTACAAAAATATGTGGACTGAATCGGGGGATATTGAAATATATATAGGTAATGAATTAATAGGGAAAGGAAACTACAAGAAAAAGAAAATAACTGCAAAGAACAAAGCAGCAGCTAATGCATATGAGAATCTTGTCAAACAATTGGGCATGAAAGATGATCATATGAGTTTTGATCAACTTTTAATTTAG	792	37.88	MNESTTESSSPPLPSLKEVEMIIGYKFKNEELLTEAFTHHSYKNDDCQSYERLEYLGDSVLNLMIAKEHYFLYPKMKTGELTQLRAANVDTEALARVAFKHGLHRFLRHQDPLLQGRVQELIEGIKEYPLHSHGLINSPKILADIVESVVGAVYVDTNLSIDATWEVVKNLLQPSITPENLNLNPVTKLNQTCQKMGIKLEYKNMWTESGDIEIYIGNELIGKGNYKKKKITAKNKAAANAYENLVKQLGMKDDHMSFDQLLI	263

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lomi1g00187	263	SMART	riboneu5	31	181	IPR000999	GO:0004525(InterPro)\|GO:0006396(InterPro)
	Lomi1g00187	263	ProSiteProfiles	Ribonuclease III family domain profile.	16	158	IPR000999	GO:0004525(InterPro)\|GO:0006396(InterPro)
	Lomi1g00187	263	SUPERFAMILY	dsRNA-binding domain-like	140	245	-	-
	Lomi1g00187	263	Pfam	Ribonuclease III domain	51	157	IPR000999	GO:0004525(InterPro)\|GO:0006396(InterPro)
	Lomi1g00187	263	CDD	RIBOc	31	181	IPR000999	GO:0004525(InterPro)\|GO:0006396(InterPro)
	Lomi1g00187	263	Gene3D	Ribonuclease III domain	13	182	IPR036389	GO:0004525(InterPro)\|GO:0006396(InterPro)
	Lomi1g00187	263	Pfam	Double-stranded RNA binding motif	185	245	IPR014720	-
	Lomi1g00187	263	Gene3D	-	183	254	-	-
	Lomi1g00187	263	ProSitePatterns	Ribonuclease III family signature.	51	59	IPR000999	GO:0004525(InterPro)\|GO:0006396(InterPro)
	Lomi1g00187	263	SUPERFAMILY	RNase III domain-like	16	178	IPR036389	GO:0004525(InterPro)\|GO:0006396(InterPro)
	Lomi1g00187	263	PANTHER	DICER-RELATED	13	248	-	GO:0003723(PANTHER)\|GO:0004525(PANTHER)\|GO:0005634(PANTHER)\|GO:0005737(PANTHER)\|GO:0030422(PANTHER)
	Lomi1g00187	263	Coils	Coil	228	248	-	-
	Lomi1g00187	263	FunFam	Endoribonuclease dicer-like 1	12	179	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lomi1g00187	-	-

Event-related genes

Select	Gene_1	Gene_2	Event_name
	121166	Lomi1g00187	Lomi4g02610
	324015	Lomi2g04482	Lomi1g00187
	333462	Lomi1g00187	Lomi2g04482

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Lomi	Lomi-Chr1:1665291	Lomi2g04110	Lomi-Chr2:46735595	dispersed
	Lomi	Lomi-Chr1:1665291	Lomi2g04482	Lomi-Chr2:49901511	wgd
	Lomi	Lomi-Chr1:1665291	Lomi3g00754	Lomi-Chr3:6152221	wgd
	Lomi	Lomi-Chr1:1665291	Lomi4g02610	Lomi-Chr4:33602815	wgd