Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lomi1g00199 | ATGACGAGATACTTTTATCCATTAACCAGTTTCCAAATTGGAGATTTGCAGTCTTATCTTTCGGATCTCAGTCTTTACTTGGCACCTGACAGTAAGGACTTTTATGTATTAGTGGATAATAGGCCATGGTTGGAAGATTTGGCCTCACGGCCTGCGCACTTATGGCAGCTTATGGTTACCAAGTCAAGAATGTCTCCTTTTGCGAACACAAGAGGGAGGAAGGGGAAGAAAGAGAGCACGGAATTTGTTGACAAAAAGGTTCATTCTAAAGGTTCAAGCCAGCCCCGAAACTTGAAAAAATGGTTTTCAGTGGTAGATGCTGCAACATTGTCAAAAAAGCAGGCCATGCTTCCTGTAAAGAAACTCAGGAGTTCATTGCTTGCGAATAGCAAATTGCATAGAACATTATATGGGTTTATCGTCTTTAAAGTGGGGTGGCAAGATGTTCGTGGTATAAATTACTTGAATGAGCTTCAGACTGATACTTCTCTTGCAATAGAGGCTAAATACATGAAAAGATGGGAGTTTGATAGCATATCTCAAGCAGCTAAATGTATAGATACATGGTTTCCAGGGACAGAACGTGAACGACATCTCTTAGAAGAGCATCTCGACTATATGCTAGGAGAGGTGTTCTATGATGCTCCTAAAGAATTTCCAGACTGTCATAGTACAAATCATGATGAAACAATCTCGAATGCTAGTGCACGGCAGGAGAATGAATCTCCCTACACTCCTCGTTGCAATCTTGGTGAAAAGATTGAAACTTTAGAAGACGAAACAAGTATATTGCATACTCCTCCTCCTAATGGGCCCTATAAGAGAAGAAAATTAATGAGTCCAGTAGGATTTAATCTCGAGACCAATTATTATAGTGAGTTATCACATGGTGGAAGTGTTTGCACACCAGTGGCGTCCTTTTATGCAAGTGATTGTGAGGGAACAGCTGAACCCACCGAGTACAAGGATGTGTTACTTTTGTTTCGGTTCAATGACCATGACCTCCCGTTTGAATTACAAGAAATAATAGTCTCTGATTTGCGATTACTTACTCTATTAGAGGCTGGACTTCCATCATGGGTGATTTTCTGTCAATCATATCCTGTTTTTTCTCATATTTATCGCCCGTGGATGTGCCCTCTAGCAAGAGCTTTGTATGTGGTTATTTCCATTGTTACGGTTGTCATTGGTTTCTACGATCTGTACAAAAACGTTCCCGTTCTGAAGGCAACTGCTTCCCGTTTATGTGGGCCGCTTTTTGATTGGATAGAAACATGGGAGATGGTATCGAGGATCAAGTATTTGGGAACTATGTTGTTTTTGCATAATTCTGAGAAAGCGATTATGTGGTTCTTGATGATGACACGCACTGTTCGATCATTTGTTTCTATTATCACACAGCCGTTAGCCGGACCATTTCTGGATTTTCTCGAGGTTCTCCTTCCTGTTTGGAATTTATTTGTTGAGGCAGGACAATATTTCTTCTCGTTCATTTGGATTCTGATGGAAACTTCTTGGGACCTAGTCGAGAATGTAGTTGAAGTCGTGCTTGTTCCCATCGGGTTAATCTTGTCAGTTATTTGGAAAATTGTGTCGACTGTTATGTACCCTATTTTCTGGAGCCTTTGGGGAATACTGTATGCTCCAATAGGTCTCATTCTTGTTTTAGCTGATTTTGTGGGATTTGTCTTCAATTACCTGTATGATTTTGTTGGTGAGATATGGCTTATTGTGAGTGGCATCTTCAAGTTAGCTTCAAGTGCTGAGGCCACAGTGAACACTTATGAGGTTTCTATTTGGCGATCTCTTTGGAATGACCTCTTCTCCCAGGTTTTCCGTGCTGTTAGGAGCATTTTACATGGATTCGTTGCATTTTTTACAGCTTGCAATAGACATCGACTAAGCATATATAATCATATTCGGGAGTTCATTCGAACGCTTAATCAGCCATCCCGGAGGTCATTGCCTTTAAATTCTAGCCAGCATTCACAGAGATCTGGGAGTCGGATACCGGCAGAAGCTGGAGAACGAAAGGTGCTGCCCAGGAGAAGTTTTAAGCAGAGTTAA | 2067 | 41.17 | MTRYFYPLTSFQIGDLQSYLSDLSLYLAPDSKDFYVLVDNRPWLEDLASRPAHLWQLMVTKSRMSPFANTRGRKGKKESTEFVDKKVHSKGSSQPRNLKKWFSVVDAATLSKKQAMLPVKKLRSSLLANSKLHRTLYGFIVFKVGWQDVRGINYLNELQTDTSLAIEAKYMKRWEFDSISQAAKCIDTWFPGTERERHLLEEHLDYMLGEVFYDAPKEFPDCHSTNHDETISNASARQENESPYTPRCNLGEKIETLEDETSILHTPPPNGPYKRRKLMSPVGFNLETNYYSELSHGGSVCTPVASFYASDCEGTAEPTEYKDVLLLFRFNDHDLPFELQEIIVSDLRLLTLLEAGLPSWVIFCQSYPVFSHIYRPWMCPLARALYVVISIVTVVIGFYDLYKNVPVLKATASRLCGPLFDWIETWEMVSRIKYLGTMLFLHNSEKAIMWFLMMTRTVRSFVSIITQPLAGPFLDFLEVLLPVWNLFVEAGQYFFSFIWILMETSWDLVENVVEVVLVPIGLILSVIWKIVSTVMYPIFWSLWGILYAPIGLILVLADFVGFVFNYLYDFVGEIWLIVSGIFKLASSAEATVNTYEVSIWRSLWNDLFSQVFRAVRSILHGFVAFFTACNRHRLSIYNHIREFIRTLNQPSRRSLPLNSSQHSQRSGSRIPAEAGERKVLPRRSFKQS | 688 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lomi1g00199 | 688 | PANTHER | OS05G0597400 PROTEIN | 2 | 670 | - | - | |
| Lomi1g00199 | 688 | MobiDBLite | consensus disorder prediction | 671 | 688 | - | - | |
| Lomi1g00199 | 688 | MobiDBLite | consensus disorder prediction | 652 | 688 | - | - | |
| Lomi1g00199 | 688 | MobiDBLite | consensus disorder prediction | 652 | 668 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lomi1g00199 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 121174 | Lomi1g00199 | Lomi4g02602 | |
| 324024 | Lomi2g04471 | Lomi1g00199 | |
| 333453 | Lomi1g00199 | Lomi2g04471 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Lomi | Lomi-Chr1:1765969 | Lomi4g02602 | Lomi-Chr4:33532657 | dispersed | |
| Lomi | Lomi-Chr1:1765969 | Lomi2g04471 | Lomi-Chr2:49794468 | wgd | |
| Lomi | Lomi-Chr1:1765969 | Lomi5g02189 | Lomi-Chr5:32387164 | wgd |