Gene detail

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Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lomi1g00204	ATGGAGCAGGAAAGAAATGATCATGAAATAATGGTGACATGGAGAGGAAAGAAGTATGTGGAAACTTCCGTCATTGAGGGGAAATCTATACAAATGATGGGAGTGCCAAAAGAAGAGATTGATCAGATTTTAAAAAGTGCAAGGATGGACATGAGAATAGCTGGATTTGATGAAGAGGAGAAGCGAATCAGAAGAATGTCAAATGGGTTTGATGCACCATTGAAGCTTCCTCAAGGAGATTATGTTTTTGGTGATTTTAAAACGCTTGAACTTCCAGGGATCGAGTTAAATCCTCCAGCTTCAGAGGCACTGCGACTAATGCACACGCTTGCTGCAGATCGAGGAATTGTTGCTATCATGAATAAGCATAAATGGCGTGTGGGAATCATGACTGAGATGGCTCCAGAAGGTTACGTTGGTGTAAGTCCTGTGTGCATCCTTGGTTTTAACAAGAATCACGGTGAGGAGATATCTTTGCGTCTTCGAACTGATGATCTCAAGGGTTTCAGAAAATATCAGAGCATTAAGAAGACCCTTCTGCATGAACTTGCCCATATGGTTTTCTCTGAACATGATGCGAAATTCTATGCTCTGGATAGTCAGCTTAATAAAGAGGCCTCTGCTCTGGACTGGACTAGATCCACGGGTCACACCTTAAGCGGGTCCCAGAAGACACAGCAATTTGGATACGAGTTTCATGTTGCTGATAGTAGTAGTAGTAGTAGTTTGTCTCATAAAGTTGGGGGAAACCAAACGTCCAATTCACTGGCTAATGCTCGGGCATCTTCAGTCGCTGCTGCTTACCAGCGCTTAGTGATTGCATCCAATAATCAATTAACAACATCTGAAACACATGATGAACCTGATCCTGATGATTCTATGGATGTGATCATGACTAAACCAGGTGCCATGGACATTACTGAAAAACAAACTAATGAACCTCTCCCTGATGACCATGAAGTGCTGAACAAGAATAATGAGCCTGACCCGGATGATAGTACTGACGGTAAAGCTATGGAATCTGAACCATGTGAAGAATTGACCCGAAACAGTGTTACTTCTGAAGAAAATAAGGAAACCTTTGTTGGTGGGTCTGAAAATGAACTTAAGAGGGAAAACAACGAGCCTGACCCTGATGATGGTATGCTGCAAGATGAAGAACTACAGAGAATTCAAGATCCAGTTGTGATTGCCTGTAATCGTCTGAAAAGATCCATTGAGACCTTGCAATCTGAAGTTAGCCCGTCAGAGGCTGCCTTGGTTTTTCAGACTCTCGTTAAGATAGTCAAGAACGTTATTGAACACCCTAATGAAACGAAGTTCAAGAAATTACGCAAGGCTAACCCTGTAATTCAGAAGAACATAGCAAGTTATAATGCTGCAATGGAGATATTGTTCTTGATTGGTTTTTGTGAAGATGTTGTTCAAGATGAGATAGGCAGAGCAGAAGCTTACTTGGTGTTGAAGAGGAATGATCCAGGCTTGTTGTGGCTGGCCAAGTCCTCTCTGGAGACATGCATTGCTTTCTAG	1530	42.22	MEQERNDHEIMVTWRGKKYVETSVIEGKSIQMMGVPKEEIDQILKSARMDMRIAGFDEEEKRIRRMSNGFDAPLKLPQGDYVFGDFKTLELPGIELNPPASEALRLMHTLAADRGIVAIMNKHKWRVGIMTEMAPEGYVGVSPVCILGFNKNHGEEISLRLRTDDLKGFRKYQSIKKTLLHELAHMVFSEHDAKFYALDSQLNKEASALDWTRSTGHTLSGSQKTQQFGYEFHVADSSSSSSLSHKVGGNQTSNSLANARASSVAAAYQRLVIASNNQLTTSETHDEPDPDDSMDVIMTKPGAMDITEKQTNEPLPDDHEVLNKNNEPDPDDSTDGKAMESEPCEELTRNSVTSEENKETFVGGSENELKRENNEPDPDDGMLQDEELQRIQDPVVIACNRLKRSIETLQSEVSPSEAALVFQTLVKIVKNVIEHPNETKFKKLRKANPVIQKNIASYNAAMEILFLIGFCEDVVQDEIGRAEAYLVLKRNDPGLLWLAKSSLETCIAF	509

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lomi1g00204	509	SMART	PGNneu	420	489	-	-
	Lomi1g00204	509	CDD	PUB-WLM	406	505	-	-
	Lomi1g00204	509	ProSiteProfiles	WLM domain profile.	79	272	IPR013536	-
	Lomi1g00204	509	MobiDBLite	consensus disorder prediction	311	353	-	-
	Lomi1g00204	509	Pfam	PUB domain	421	494	IPR018997	-
	Lomi1g00204	509	MobiDBLite	consensus disorder prediction	361	382	-	-
	Lomi1g00204	509	PANTHER	ZINC METALLOPROTEINASE-LIKE PROTEIN	21	360	-	-
	Lomi1g00204	509	Pfam	WLM domain	94	271	IPR013536	-
	Lomi1g00204	509	SUPERFAMILY	PUG domain-like	398	507	IPR036339	-
	Lomi1g00204	509	MobiDBLite	consensus disorder prediction	277	382	-	-
	Lomi1g00204	509	Gene3D	-	403	503	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lomi1g00204	K22685	DNA-dependent metalloprotease WSS1 [EC:3.4.24.-]

Event-related genes

Select	Gene_1	Gene_2	Event_name
	324028	Lomi2g04463	Lomi1g00204
	333449	Lomi1g00204	Lomi2g04463

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Lomi	Lomi-Chr1:1802437	Lomi2g04463	Lomi-Chr2:49748142	wgd