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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lomi1g00220 ATGAAGCGAATATTGGTGGCGATGAGGTTGAACGTGTGGAACATGAGAAAGAGTCCTAAAGTAGCCGATGAAAGCATGTTTGTGGAAGGAAATGGACCCGAGTTTGCAACTATGGCTCACCATACAAGGCAAGGGTTCTCAAGTAGTCTTTCTATTATATACAACATAATAAGAGCTCCATTCGTACTTCTATCATGCATATCGACCCACCACCATGTAAGTGGTAGTACTGATGGAGTTTGGGTGTCTGGAGAGGTTGCACGAATATCTGAGGTTAATCATCTTATGGTTAATGATAGCATGCGTTACGCTATTCTGATGTAA 324 41.98 MKRILVAMRLNVWNMRKSPKVADESMFVEGNGPEFATMAHHTRQGFSSSLSIIYNIIRAPFVLLSCISTHHHVSGSTDGVWVSGEVARISEVNHLMVNDSMRYAILM 107
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lomi1g00220 107 PANTHER BNAC03G44900D PROTEIN 1 107 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lomi1g00220 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
121177 Lomi1g00220 Lomi4g02588
121178 Lomi1g00220 Lomi5g02173
324037 Lomi2g04446 Lomi1g00220
333440 Lomi1g00220 Lomi2g04446
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Lomi Lomi-Chr1:1896858 Lomi2g04446 Lomi-Chr2:49625383 wgd
Lomi Lomi-Chr1:1896858 Lomi3g00778 Lomi-Chr3:6346263 wgd
Lomi Lomi-Chr1:1896858 Lomi4g02588 Lomi-Chr4:33429220 wgd
Lomi Lomi-Chr1:1896858 Lomi5g02173 Lomi-Chr5:32240779 wgd