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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lomi1g00222 ATGAAACCTAGTAAACTCAAGTTTCGTGTTTCAGAACTCTCGGCAGAGTATTCAAACAACGAGATGACCATTTTTGCAATTCTGGGCCCACTTGCGAACGCGCCTGTAGTCAATCAAGTGTGGCAAGTTAGGACCTTGGATCAGAATGAAGTCCCTCAAATGCATCCAACGGAGTTTCAGAATCTTCTATCGACTGGAGTCATTGATTTTCCGTCCACTTTTTAG 225 43.56 MKPSKLKFRVSELSAEYSNNEMTIFAILGPLANAPVVNQVWQVRTLDQNEVPQMHPTEFQNLLSTGVIDFPSTF 74
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lomi1g00222 74 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 2 72 - -
Lomi1g00222 74 Pfam Protein of unknown function (DUF568) 3 70 IPR045265 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lomi1g00222 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
324038 Lomi2g04444 Lomi1g00222
333439 Lomi1g00222 Lomi2g04444
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Lomi Lomi-Chr1:1911477 Lomi2g04444 Lomi-Chr2:49601531 dispersed
Lomi Lomi-Chr1:1911477 Lomi2g04443 Lomi-Chr2:49600233 wgd