Gene detail

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Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lomi1g00241	ATGGAACATTCGTCAAAGGTTCCAGAAAATGAAATTGATCAAGTCGATATGCTGAATGCTATTTACGATGGTTATGGAGGTGTCATTGTTAACATTGAAAACGATATGGATGAAAATGTCTTTACCACTTTACTTCAAGCATCAATATCCCAGTGGAGGCTGCAAGAAAAAAAGGGAGTTTGGCTTAAATTGTCACTTGAACTTGTAAATCTTGTTAAGCCTGCAGTAAAGGAAGGATTTTGGTACCATCATGCTGAACCAACATACGTGATGCTCACATATTGGATTCCTGAAACCAATAGTACTCTCCCACCTAATGCTTCCCATCGAGTTGGTGTTGCTTCTTTTGTGGTCAATGATAATGGGGAGCTTCTTGTAGTCCAAGAAAAAAGTGGAGTTTTCAAAGGCTCAGGGGTCTGGAAGTTACCAACTGGTACTGTTGAAGAGGGTGAAGATCTAAGTGCAGCTGCAATCAGGGAAGTGAAAGAAGAAGCTGGAATTGATACAGAATTTATGGAAGTCCTTGCATTCAGGCAAAGCCACAAGTCATTTTTTAGCAAGTCAGATCTAATGTTTGTGTGTATGCTAAAACCAGTATCATTTGATATTGTCAAGCAAGATTCAGAGATTGAAGCAGCACAGTGGATGCCAGTGGAAGAATACGCCAACCAGCCCTTTATTAAAGAACATAAATCCTTTGACTACATTGCTAAAATATGCATGGCAAAAAAGGATAACAAATATGTTGGCTTCTCTGCATTGCCTACATCAACCGCTACATCTGCCAAAAAGAGCTATTTGTATTCCAGTTATCAAGACGAGTAA	825	39.27	MEHSSKVPENEIDQVDMLNAIYDGYGGVIVNIENDMDENVFTTLLQASISQWRLQEKKGVWLKLSLELVNLVKPAVKEGFWYHHAEPTYVMLTYWIPETNSTLPPNASHRVGVASFVVNDNGELLVVQEKSGVFKGSGVWKLPTGTVEEGEDLSAAAIREVKEEAGIDTEFMEVLAFRQSHKSFFSKSDLMFVCMLKPVSFDIVKQDSEIEAAQWMPVEEYANQPFIKEHKSFDYIAKICMAKKDNKYVGFSALPTSTATSAKKSYLYSSYQDE	274

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lomi1g00241	274	FunFam	nudix hydrolase 2	15	101	-	-
	Lomi1g00241	274	Pfam	Nudix hydrolase domain	19	96	IPR040618	-
	Lomi1g00241	274	ProSiteProfiles	Nudix hydrolase domain profile.	108	240	IPR000086	-
	Lomi1g00241	274	Gene3D	Nucleoside Triphosphate Pyrophosphohydrolase	110	249	-	-
	Lomi1g00241	274	FunFam	Nudix hydrolase 8	110	248	-	-
	Lomi1g00241	274	PRINTS	Anti-sense to fibroblast growth factor protein GFG signature	68	86	IPR003293	-
	Lomi1g00241	274	PRINTS	Anti-sense to fibroblast growth factor protein GFG signature	90	106	IPR003293	-
	Lomi1g00241	274	PRINTS	Anti-sense to fibroblast growth factor protein GFG signature	194	218	IPR003293	-
	Lomi1g00241	274	PRINTS	Anti-sense to fibroblast growth factor protein GFG signature	106	124	IPR003293	-
	Lomi1g00241	274	PRINTS	NUDIX hydrolase family signature	140	154	IPR020476	-
	Lomi1g00241	274	PRINTS	NUDIX hydrolase family signature	154	169	IPR020476	-
	Lomi1g00241	274	ProSitePatterns	Nudix box signature.	145	166	IPR020084	GO:0016787(InterPro)
	Lomi1g00241	274	PANTHER	NUDIX HYDROLASE RELATED	6	272	IPR003293	GO:0035529(PANTHER)\|GO:0047631(PANTHER)\|GO:0051287(PANTHER)
	Lomi1g00241	274	Gene3D	-	15	101	-	-
	Lomi1g00241	274	Pfam	NUDIX domain	109	231	IPR000086	-
	Lomi1g00241	274	CDD	Nudix-Hydrolase-12	109	240	-	-
	Lomi1g00241	274	SUPERFAMILY	Nudix	76	241	IPR015797	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lomi1g00241	K26956	ADP-ribose/NAD+ diphosphatase [EC:3.6.1.13 3.6.1.22]

Event-related genes

Select	Gene_1	Gene_2	Event_name
	324053	Lomi2g04417	Lomi1g00241
	333424	Lomi1g00241	Lomi2g04417

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Lomi	Lomi-Chr1:2078804	Lomi2g04417	Lomi-Chr2:49438628	wgd