Gene detail

Gene Search

Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lomi1g00247	ATGCTTAAGCTATGCAAAATGATTGGACTAACGGCACTCTTTGAGGTACATGATGAGAACGAAATGGATCGTATGCTGGAAATTGATGGAATTGAACTTATTGGCATCAACAATCGTAGCCTTGAAACATTTCTAGTTGATATTAGTAACACAAAGAGGTTGCTTGAAGGTGAGGGCGGGGAGAAGATTAGGCAGAAAGACATTATAGTGGTTGGAGAGTCTGGACTGTTCATTCCTGCTGATGTTGCCTATGTACAAGAAGCTGGCGTTAAAGCAATATTGGTTGGAGAGTCAATTGTGAAGCAGAAAGATCCAACAAAAGGAGTTAGAGATCTTTTTGGAAAAGATATATCGGCTTAG	360	40.0	MLKLCKMIGLTALFEVHDENEMDRMLEIDGIELIGINNRSLETFLVDISNTKRLLEGEGGEKIRQKDIIVVGESGLFIPADVAYVQEAGVKAILVGESIVKQKDPTKGVRDLFGKDISA	119

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lomi1g00247	119	Gene3D	Aldolase class I	1	116	IPR013785	-
	Lomi1g00247	119	SUPERFAMILY	Ribulose-phoshate binding barrel	2	114	IPR011060	-
	Lomi1g00247	119	Pfam	Indole-3-glycerol phosphate synthase	3	112	IPR013798	GO:0004425(InterPro)
	Lomi1g00247	119	PANTHER	TRYPTOPHAN BIOSYNTHESIS PROTEIN	1	115	IPR045186	GO:0000162(PANTHER)\|GO:0004425(PANTHER)\|GO:0004425(InterPro)\|GO:0004640(PANTHER)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lomi1g00247	-	-

Event-related genes

Select	Gene_1	Gene_2	Event_name
	324058	Lomi2g04412	Lomi1g00247
	333419	Lomi1g00247	Lomi2g04412

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Lomi	Lomi-Chr1:2117589	Lomi2g04412	Lomi-Chr2:49395800	wgd
	Lomi	Lomi-Chr1:2117589	Lomi3g00800	Lomi-Chr3:6478229	wgd