Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lomi1g00260 | ATGCATAAAACGGCACAATCGTGGTTCAGTGGAGGTCCGAGCCAAACGAACAAAGATCTAACGCAACAATCTCCGTCTCTACTTGCTGATTGGAACGCTTACGCTGCATCATCACAGTCTCAAGATCTAGATTCTGGCCTTGGTTTCGATATCGAATCTGCTGTTAGAACCGCTAATGATAAGGTTTCCGGTACTTTTAATGTAGTTTCACAGGGAGTTAGGGGCATACCTGGAAATCTGCAGTCTGCTACGAGCAATGTCCCAACTGGAAAATCTCTGGTGACATTTGGTACACTTCTTGCAGTTGGGGTGTTCCTCGTCTTCATCGCAGTCACTGTATTTCTACCAGTCATGGTGCTTGTGCCTCAGAAGTTTGCAATCTGTTTCACTATTGGCTGTGCCCTCATAATTGCTTCATTTTTTGCTCTTAAAGGATATAGAACTCAGTTTGCTCATATGACATCTAAAGAGAGACTTCCTATCACGTTGGGATTTATTGGCAGCATGGTGGGTACCATTTATGTTTCAATGGTGCTTCACAGTTACGTTCTTTCTGTGTTCTTCTCTATTTTACAGGTCATCTCACTGTCATACTATGCAATTTCCTACTTTCCCGGAGGATCGGCTGGCGTGAAATTCTTCACTTCTGCCATTACTTCTTCAATTTTGAGATGCTTTGGGAGGTGA | 687 | 43.38 | MHKTAQSWFSGGPSQTNKDLTQQSPSLLADWNAYAASSQSQDLDSGLGFDIESAVRTANDKVSGTFNVVSQGVRGIPGNLQSATSNVPTGKSLVTFGTLLAVGVFLVFIAVTVFLPVMVLVPQKFAICFTIGCALIIASFFALKGYRTQFAHMTSKERLPITLGFIGSMVGTIYVSMVLHSYVLSVFFSILQVISLSYYAISYFPGGSAGVKFFTSAITSSILRCFGR | 228 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lomi1g00260 | 228 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
| Lomi1g00260 | 228 | Pfam | Got1-Sft2-like family | 93 | 205 | IPR007305 | GO:0016192(InterPro) | |
| Lomi1g00260 | 228 | PANTHER | UNCHARACTERIZED | 1 | 219 | IPR011691 | GO:0016020(InterPro)|GO:0016192(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lomi1g00260 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 324065 | Lomi2g04403 | Lomi1g00260 | |
| 333412 | Lomi1g00260 | Lomi2g04403 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Lomi | Lomi-Chr1:2181586 | Lomi4g02912 | Lomi-Chr4:36126337 | dispersed | |
| Lomi | Lomi-Chr1:2181586 | Lomi2g04403 | Lomi-Chr2:49330201 | wgd |