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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lomi1g00261 ATGGCAAAGCAAAAGATTGTCGTTAAGGTGACCATGAACACTGAGAAGAAAACTCGTAAGGCTTTGAAGATCGCTGTTAGTCTCTCTGGAGTCGAGTCAGCCTCATTTGTTGGACCAGATAAAGACCAGATAGCGGTGACCGGAGAAGGAATCGACTCGGTCGAATTAACGACTTTGTTAAGGAAAAGTGTTGGATACACTGAGCTAGTGAGTGTTGGTCCCGACGAGAAGAAACCCGAAAATAAGGAAACGAAAGCAGTTGAGATGCCGCAAATTAATCCTTATCAGTACTATTATAGTTACGATTATAATGGCTATGGGATGCCATACTACTATCTGTATGAGAAGTGA 351 42.45 MAKQKIVVKVTMNTEKKTRKALKIAVSLSGVESASFVGPDKDQIAVTGEGIDSVELTTLLRKSVGYTELVSVGPDEKKPENKETKAVEMPQINPYQYYYSYDYNGYGMPYYYLYEK 116
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lomi1g00261 116 Gene3D - 1 77 - -
Lomi1g00261 116 PANTHER OS04G0464100 PROTEIN 4 89 IPR044296 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lomi1g00261 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
324066 Lomi2g04396 Lomi1g00261
333411 Lomi1g00261 Lomi2g04395
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Lomi Lomi-Chr1:2199657 Lomi2g04396 Lomi-Chr2:49278492 dispersed
Lomi Lomi-Chr1:2199657 Lomi1g00262 Lomi-Chr1:2220912 tandem
Lomi Lomi-Chr1:2199657 Lomi2g04392 Lomi-Chr2:49263579 wgd