Gene detail

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Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lomi1g00286	ATGTCTATTTCACTTCTTCCCCTCACATCGGTTCCATGCAAACCGTCCACAAACAAACCATTCAACTCCAAGCCATCGTTCAAAACTCGAACCAACCGAACCCAAAATGGGTTCAGAGTCTCACGTAACGTTACACCACCAAATAATGACAATTATGAAAACCAACTCATACTCCCCGAACAACAAAAACTAATCCTTCCAAATAATAATAACAATGTAGATCGAAGAAATCTCCTCCTTGGGCTTGGCGGCCTCTACACGGCCGCCAACTTACCGGCTGCATTAGCCGCTCCCATAACGGGTCCTGATGATATCTGGACATGCGAGACTGCAGTTGATGCACGTACTGGTTCTAGTCTGGAAGGTGGTGAAAGGACCACCAAATGTTGCGCTCCTAATTTAGACAAGAAAGTTAAAAACTTCGAGTTTCCAGATAGTAAAGAAGAGGTAAGGATGAGATGGCCGGCACATAAAGGAACTGAAGATCAAATCAGAGATTATAAAGACGCCATCAATGCCATGAAGAATCTCGACCCAAACCACCCGCATAGCTTCCAAAGCCAAGCGAAAATTCATTGTGCTTATTGCAATGGAGGTTATACGCAACCCGGATCAGATCTCAAAATTCAGATTCATAACTCGTGGCTCTTCTTTCCGTTCCATCGTTGGTACCTCTACTTCTACGAAAGAATACTCGGAAAGTTGATCAACAAGCCAACTTTCGCGTTACCTTACTGGAATTGGGACAATCCAGAATCCGGCGCAATGGTGATTCCCGATATCTTTTTGGGGGACGATAAAAACCCGTTGTATGACGTTTACCGTAACGCAGAGCATCTACCACCAACAGTAGTAGATCTGAACTTTAGTCCTCGTCAAACAATAAGAAGAACATCTGATGAACAAATAAGGTGCAATCTTAGAACTATGTACAAGGAATTGGTCAGTAATGCAGCCGGTGCAGACGACTTTTTTGGGAGCCTGTACGTAGCCGGACAGAAAGAAGCGGCTAAAGCTGGATCCATTGAAGGCGGTTCTCATACTGCCATACACGTATTTGTAGGCACAGATAAGACTAAGAGTACGAGTAAGTTTGGTGAAGACATGGGTAACTTCTACTCTGCTGGGTATGACCCTTTGTTTTACGTCCACCATGCGAACGTCGATCGTATGTGGAAAGTATGGAAGGATTTGAAAGAACTAGGGCCAAGATTTGAAGGACACACGGAACCGACACACGAGGACTGGTTAAACGCGTCATATGTGTTCTATGACGAGAATGAGCAACCCGTACGTGTTTGTAACAGAGACAGTGTTGATTTAGACAAGCTCAAGTACAACTTCCAACCGTCCGATCGCGAGATCTCGGACGTGTTGAAGAGTAGACCAACACAACGTAGCAAAACCGAAAAAGGTACATCATTTAAAGATGTGAAAACATTGGGCGAATTTACATTCCCGGTGACACTAGACAAGATTTTTAAGGTTCGTGTGAAGAGGCCGAAGGTAAACAGGACGGCTGAAGAGAAGTTAAAAAAGAAGGAGGTCTTGACTATAGATGAAATAAAATTTGAGGGTGACGAGTTTGTCAAGTTCGATGTGTTTGTAAATGACAACGTTGAAAATACAAAGGATGGGGAGAAACCGAAATACCCAGACGTATGTAGTGCGTCGTACGCAGGTACTTTTGCACGGATTTCACACGGCGATATGAGGGAAATGACGATGATGGAGAGTGATAAGGAGACAAATGCAGCGAGTTTCGTGTTAACGGAGTTGTTTGAGGACACAAAGACTGATGACAAAGAGGAAGCGGTGGTCGCATTCGTGCCAAGGACAGGGTGCGAAAACCTCACCATTTCCGGAATCAAGATCGAGCTGAAAGATATCTAG	1893	44.32	MSISLLPLTSVPCKPSTNKPFNSKPSFKTRTNRTQNGFRVSRNVTPPNNDNYENQLILPEQQKLILPNNNNNVDRRNLLLGLGGLYTAANLPAALAAPITGPDDIWTCETAVDARTGSSLEGGERTTKCCAPNLDKKVKNFEFPDSKEEVRMRWPAHKGTEDQIRDYKDAINAMKNLDPNHPHSFQSQAKIHCAYCNGGYTQPGSDLKIQIHNSWLFFPFHRWYLYFYERILGKLINKPTFALPYWNWDNPESGAMVIPDIFLGDDKNPLYDVYRNAEHLPPTVVDLNFSPRQTIRRTSDEQIRCNLRTMYKELVSNAAGADDFFGSLYVAGQKEAAKAGSIEGGSHTAIHVFVGTDKTKSTSKFGEDMGNFYSAGYDPLFYVHHANVDRMWKVWKDLKELGPRFEGHTEPTHEDWLNASYVFYDENEQPVRVCNRDSVDLDKLKYNFQPSDREISDVLKSRPTQRSKTEKGTSFKDVKTLGEFTFPVTLDKIFKVRVKRPKVNRTAEEKLKKKEVLTIDEIKFEGDEFVKFDVFVNDNVENTKDGEKPKYPDVCSASYAGTFARISHGDMREMTMMESDKETNAASFVLTELFEDTKTDDKEEAVVAFVPRTGCENLTISGIKIELKDI	630

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lomi1g00286	630	PRINTS	Tyrosinase copper-binding domain signature	346	357	IPR002227	GO:0016491(InterPro)
	Lomi1g00286	630	PRINTS	Tyrosinase copper-binding domain signature	377	395	IPR002227	GO:0016491(InterPro)
	Lomi1g00286	630	PRINTS	Tyrosinase copper-binding domain signature	212	229	IPR002227	GO:0016491(InterPro)
	Lomi1g00286	630	PRINTS	Tyrosinase copper-binding domain signature	243	248	IPR002227	GO:0016491(InterPro)
	Lomi1g00286	630	Pfam	Protein of unknown function (DUF-B2219)	486	627	IPR022740	GO:0004097(InterPro)
	Lomi1g00286	630	ProSitePatterns	Tyrosinase CuA-binding region signature.	212	229	IPR002227	GO:0016491(InterPro)
	Lomi1g00286	630	Pfam	Polyphenol oxidase middle domain	412	451	IPR022739	GO:0004097(InterPro)
	Lomi1g00286	630	Coils	Coil	157	177	-	-
	Lomi1g00286	630	Gene3D	-	97	453	IPR008922	-
	Lomi1g00286	630	ProSitePatterns	Tyrosinase and hemocyanins CuB-binding region signature.	378	389	IPR002227	GO:0016491(InterPro)
	Lomi1g00286	630	PANTHER	TYROSINASE FAMILY MEMBER	73	576	IPR050316	-
	Lomi1g00286	630	Pfam	Common central domain of tyrosinase	183	397	IPR002227	GO:0016491(InterPro)
	Lomi1g00286	630	SUPERFAMILY	Di-copper centre-containing domain	125	450	IPR008922	-
	Lomi1g00286	630	MobiDBLite	consensus disorder prediction	14	50	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lomi1g00286	K00422	polyphenol oxidase [EC:1.10.3.1]

Event-related genes

Select	Gene_1	Gene_2	Event_name
	324082	Lomi2g04369	Lomi1g00286
	333395	Lomi1g00286	Lomi2g04369

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Lomi	Lomi-Chr1:2440034	Lomi2g04369	Lomi-Chr2:49045002	dispersed
	Lomi	Lomi-Chr1:2424129	Lomi1g00286	Lomi-Chr1:2440034	proximal
	Lomi	Lomi-Chr1:2440034	Lomi1g00287	Lomi-Chr1:2462412	tandem