AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lomi1g00324 ATGGAAGGTTTAACATTAGAATTAGAAGAAACAATAAAGAAGGGTGGAGAAAAGTATAGGTCGTTCATCCATGAAGAAGCTGAGAACACTACTCACTGGAGACACGGTGGTCCTCCGATTTATGACACCGTTAACCAACTCTTCGAACAAGGCCGAACCAAGGTATGGGAAAAAGGATCACTAGAGGAAACGGTTCAAAATGCAATCAAGTCATGGGAGATGGAGCTTAGCCACAAGACACGTGTACAAGACTTCAAGACCATTAACCATCAAAAGTTCAAACTCATTGTCAACGGGAAGGAAGGTTTATCAGCTGAAGAAACGTTGAAGGTTGGAAGTTACAATGTATTATTGAAGAATACACTTCCTGAAGAGTACAAGTATTACAAAGCAGAAGAAGAGACGTTCGAATCATCGCACGATGCTTTTCGATCAGCGTTTCCTCGAGGATTTGCATGGGAGGTGATAAGCGTTCATTCGGGACCACCGGTGATATCGTACAAGTTCCGCCATTGGGGTTACTTTGAAGGTCCCTTCAAAGGCCATGCTCCTACAGGAGAAATGGTTGATTTTTATGGAATGGGAATCCTTAAGGTTGATGAATCGTTGAGAGCAGAAGATGTCGAGGTTTATTATGATCCTGCGGATCTTATCTCGAAGTTGCTTAAAGGGCCGTTGATCTCTGAACAACAAAACGATGTAGCGGATGATGCTGAGCAATCAAATACCGGTGGCTGCCCCTACAAGAAGTTGTAA 756 43.12 MEGLTLELEETIKKGGEKYRSFIHEEAENTTHWRHGGPPIYDTVNQLFEQGRTKVWEKGSLEETVQNAIKSWEMELSHKTRVQDFKTINHQKFKLIVNGKEGLSAEETLKVGSYNVLLKNTLPEEYKYYKAEEETFESSHDAFRSAFPRGFAWEVISVHSGPPVISYKFRHWGYFEGPFKGHAPTGEMVDFYGMGILKVDESLRAEDVEVYYDPADLISKLLKGPLISEQQNDVADDAEQSNTGGCPYKKL 251
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lomi1g00324 251 Gene3D - 120 224 - -
Lomi1g00324 251 PANTHER PATHOGENESIS-RELATED FAMILY PROTEIN 9 248 IPR053218 -
Lomi1g00324 251 SUPERFAMILY NTF2-like 135 221 IPR032710 -
Lomi1g00324 251 MobiDBLite consensus disorder prediction 231 251 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lomi1g00324 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
324097 Lomi2g04342 Lomi1g00324
333380 Lomi1g00324 Lomi2g04342
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Lomi Lomi-Chr1:2763523 Lomi4g00993 Lomi-Chr4:15627436 dispersed
Lomi Lomi-Chr1:2763523 Lomi2g04342 Lomi-Chr2:48799713 wgd