Gene detail

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Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lomi1g00328	ATGGATACTACTTCATATTCTCTATTACTAGTCTTTTTATGCTTCTTTTTCCGATCATTCTCCATCTCCGAAGCCCTTGTTCCTCTCAATGAAACCTTCCGTTACGTGAACGAAGGCGATTTTGGAGAGTCCGAGTCCGAATACGCTCCAACATACCGTCCTCTTCCACCATTCACCTTCCCTTTCCAACTTTGTTTCTACAACACCACTCCAAATGCATACACTCTCAGTCTCCGCATAGGGACCAGGCGTAGCCAGTCCGTCATGCGATGGGTTTGGGAAGCGAATCGGGGCAACCCGGTTCGAGAAAATGCCACATTCTCATTCGGTCAGGATGGTAACCTCATCTTGGCCGATGCAGATGGGCGCATCGCATGGCAAACCAATACCTCCAATAAAGACGTGGTTGGTTTCGCCATACTGGAGGATGGTAACATGGTCCTTCGTGACTCGAAAGGTAACTTCGTCTGGCAAAGTTTCGATTCTCCAACGGATACTCTTTTAGTTGGACAATCTCTCCGGGTTAATGGAGGCCCGTTTAAGCTCGTAAGTCGGGATTCGATAACAAACAATGTTAACGGGGATTATAGTCTCGTAATAGAGCCTAAAAGATTGGCTTTGTATTACAAGAACACCATGCGCTACTGGTCGACCTCATTCACCGAATTAAATCGAAAAATTGTGAATGTGATAAATGTGACACTTAACATAGCCGAAACTGAATACGAAACAAACCATTTTCACCGACTTTATTTTGAGCTTTCGAACGCTCGACCTTTTGAAGGTAATCCTTATTTAGATATGGGCATAATCCGATACAATAGCTCATTGTCGTATCTTCGATTAGGCATTGATGGGAACTTAAGACTCTTCACTTATCGTCCAAATGTCGTTTTTAACGCGTGGGCCCAATTGTACACTTTGTTCGATAGAGGGGAAAGTTCGGTAGACAATAGCGGGGTTGGAAAGGTAATTGAAGACGAGTGCCAATTACCGAATAGGTGTGGGAAGTTTGGGCTTTGTGAGGAGAGTCAATGCGTCGGGTGCCCGACACCGAATGGAGCTTTGGCGTGGAGTAAGGATTGTGACGCTAAGTCGCCGGGTTGTAACCCAAGTAGTTTTAAATATTATGAGGTGAAAGGGGCTGACCATTTCACGGTTAAGTACACACCCGGGACAGGGGTGAGACAGAGTGTATGCGAGAGCAGATGCACGAAGGATTGCAAGTGTTTGGGTTACTTTTATCACACAGATCAGTCGAGATGTTGGGTCGTTAACGAGTTGAAAACGTTGACACGAGTAGGTAACTCGACTAGTTTGGCGTATATCAAAACACCTATCGGCTAG	1347	45.43	MDTTSYSLLLVFLCFFFRSFSISEALVPLNETFRYVNEGDFGESESEYAPTYRPLPPFTFPFQLCFYNTTPNAYTLSLRIGTRRSQSVMRWVWEANRGNPVRENATFSFGQDGNLILADADGRIAWQTNTSNKDVVGFAILEDGNMVLRDSKGNFVWQSFDSPTDTLLVGQSLRVNGGPFKLVSRDSITNNVNGDYSLVIEPKRLALYYKNTMRYWSTSFTELNRKIVNVINVTLNIAETEYETNHFHRLYFELSNARPFEGNPYLDMGIIRYNSSLSYLRLGIDGNLRLFTYRPNVVFNAWAQLYTLFDRGESSVDNSGVGKVIEDECQLPNRCGKFGLCEESQCVGCPTPNGALAWSKDCDAKSPGCNPSSFKYYEVKGADHFTVKYTPGTGVRQSVCESRCTKDCKCLGYFYHTDQSRCWVVNELKTLTRVGNSTSLAYIKTPIG	448

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lomi1g00328	448	Gene3D	-	62	162	IPR036426	-
	Lomi1g00328	448	PIRSF	SLG	1	448	IPR035446	-
	Lomi1g00328	448	CDD	B-lectin	46	163	IPR001480	-
	Lomi1g00328	448	Pfam	D-mannose binding lectin	92	176	IPR001480	-
	Lomi1g00328	448	SMART	blect-4	46	163	IPR001480	-
	Lomi1g00328	448	FunFam	Os04g0303100 protein	82	215	-	-
	Lomi1g00328	448	ProSiteProfiles	Bulb-type lectin domain profile.	43	161	IPR001480	-
	Lomi1g00328	448	SUPERFAMILY	alpha-D-mannose-specific plant lectins	71	218	IPR036426	-
	Lomi1g00328	448	PANTHER	G-TYPE LECTIN S-RECEPTOR-LIKE SERINE-THREONINE-PROTEIN KINASE SD2-5	62	445	IPR051343	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lomi1g00328	-	-

Event-related genes

Select	Gene_1	Gene_2	Event_name
	333377	Lomi1g00328	Lomi2g04339

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Lomi	Lomi-Chr1:2807250	Lomi2g04339	Lomi-Chr2:48775921	dispersed
	Lomi	Lomi-Chr1:2800469	Lomi1g00328	Lomi-Chr1:2807250	tandem
	Lomi	Lomi-Chr1:2807250	Lomi1g00329	Lomi-Chr1:2812072	tandem