Gene detail

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Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lomi1g00336	ATGCTCTGTTTACCTCTACAATCAATCTCACCTCACCTCAAAACCTCCTTAAAGTCACAGATCATAGGGTTCGAAGTCTTATCAAAACCACAATTCGTAAATTTATATAATCATCGTAATTATACAACCAATATCATTAACAGGAGTCATGGAGATAGATACAGATATAGATATAGATATAGATACAGTCCCTGTTACTGTTTGAACTTGAATACGGTTAATTTTAGTTCGAGTGAAGAAGAGTTTGATATGGAATTGGGGCGTTTGTTGAGGTTGTTACCTGAGGAGATGCGAAGTAGGGTTACTGAGCATCATGAACTTCATCAATTGATTGAAGTTGTTATGGATTTAGGTCGGAAACCGTTGGCTCGGTTTCCGTCTGGTGATTTCGTGTTATCGGATAATTTGATCACTATTAATGATCTTGAACATGCTACTTCTTTGGTGGGTGATTTTGCTGTTGATAATAGAGCTGGGATCAGCAGAACGTTGCACCGAATTAGTGCTATTAGAAACCGGAAGGGTGCAGTTATTGGGCTAACATGTCGTGTTGGTCGAGCTGTATCAGGGAGTGCTAAGTTATTGCAAGATTTGGTTAAAGATGGATCTTCTTTATTGCTTATTGGACCTCCAGGAGTGGGAAAAACTACAATTATCAGGGACATTGCTCGAATGCTTGCAGATGAGTATAAGAAACGTGTCATGATTGTTGACACCTCGAATGAAATTGGTGGAGATGGTGATATACCTCATTCGGGTATAGGTAATGCTCGACGAATGCAAGTTCCTGATTCTGATATGCAACATAAGGTGCTGATAGAAGCAGTTGAAAATCATATGCCTCAAGTGATCGTAATAGATGAAATTGGCACAAAACTTGAAGCAGCAGCTGCAAGCACTATTGCACAACGTGGGATTCAGTTAGTTGCAACTGCTCATGGTATTACAATAGAGAATTTAGTGATGAATCCTTCATTGGAGATGCTTGTTGGAGGAATACAGAGTGTAACACTAGGAGATGAAGAGGCAAACCGGAGGGGTGTACAGAAATCAGTGCTGGAGAGAAAAGGTCCTTCTACTTTCGATTGTGCTGTGGAGATCATTTCTAGGCTTGAATTGAGAGTTCATAGTAGTCTGGAATCAACAGTTGATGCCATCCTTTCTGGCCGTTCTCCAAAATATCAAATTTGCAAGCTAGATGAGGGAGTGGTAGATGTTACGTTACAAAGTGATCCAGTTGCATATGATTCATTTGTCAAGAAGAGTGTTGATACGATTGAAGGCATTCCACCATGGACCAGTGAAAAGCTTACACCTGAAAAGCTCATCTCTAAAGAGTCTCAAAGTGACAGAGATAATCCTTACGATAAACCACCCTTGTGTTTATTTCTCTATGGGGTCTCGGAGACAAGTGCACAACAAGTATTTACACACTTAAAGATGGAATCCTCTGTAGAATATACAGAAAATATTAGTGAAGCAGATGCAATACTTGCACTACTGTCCAAAATAAAAAAAAATTCTCGGATACAGTCTGCTGCTCACTCTAGTGACATACCTATATATGTCACGAAGACAAGCTCATTGATGCAGTTAACAAAGGCCATAGAGGCCTTAGTGACTGATTATGATAATGATTTTGAAGACATTGAAGATGAATATTCTCAGATAAATGAATCAGAGAAGACTGATGCTTTGGAGGAAGCGAGGATTGCCATTGAACAGGTTGTAATCCCAAAAGGGGAGCCTGTAGAACTACTTCCAAGGCCATCCAACATTATGTTGCTTCAGAAGGATTTAATTCGTAAATATAAGCTACAAGCACAGAAAGTTGGTTCAGAGGTGAATGTAAGGCTTCGTATTCTACCTTTTCAAAGTCACAAAGAAGATAAAGACTATGACAATGATGATAATGATGATGATGTTGATGATGAACTTTGTGAGTTGTCTGAAACAAATGGCTCACCCTACCCAGTGAATAGATTGCCCTTCCTGCCTGAGTAG	2004	39.52	MLCLPLQSISPHLKTSLKSQIIGFEVLSKPQFVNLYNHRNYTTNIINRSHGDRYRYRYRYRYSPCYCLNLNTVNFSSSEEEFDMELGRLLRLLPEEMRSRVTEHHELHQLIEVVMDLGRKPLARFPSGDFVLSDNLITINDLEHATSLVGDFAVDNRAGISRTLHRISAIRNRKGAVIGLTCRVGRAVSGSAKLLQDLVKDGSSLLLIGPPGVGKTTIIRDIARMLADEYKKRVMIVDTSNEIGGDGDIPHSGIGNARRMQVPDSDMQHKVLIEAVENHMPQVIVIDEIGTKLEAAAASTIAQRGIQLVATAHGITIENLVMNPSLEMLVGGIQSVTLGDEEANRRGVQKSVLERKGPSTFDCAVEIISRLELRVHSSLESTVDAILSGRSPKYQICKLDEGVVDVTLQSDPVAYDSFVKKSVDTIEGIPPWTSEKLTPEKLISKESQSDRDNPYDKPPLCLFLYGVSETSAQQVFTHLKMESSVEYTENISEADAILALLSKIKKNSRIQSAAHSSDIPIYVTKTSSLMQLTKAIEALVTDYDNDFEDIEDEYSQINESEKTDALEEARIAIEQVVIPKGEPVELLPRPSNIMLLQKDLIRKYKLQAQKVGSEVNVRLRILPFQSHKEDKDYDNDDNDDDVDDELCELSETNGSPYPVNRLPFLPE	667

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lomi1g00336	667	CDD	R3H-AAA	564	623	IPR034081	-
	Lomi1g00336	667	Pfam	Sporulation stage III, protein AA	180	331	IPR045735	-
	Lomi1g00336	667	FunFam	uncharacterized protein ycf45 isoform X2	166	383	-	-
	Lomi1g00336	667	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	84	344	IPR027417	-
	Lomi1g00336	667	SMART	AAA-5	201	332	IPR003593	GO:0016887(InterPro)
	Lomi1g00336	667	MobiDBLite	consensus disorder prediction	634	648	-	-
	Lomi1g00336	667	PRINTS	Endopeptidase La (Lon) serine protease (S16) signature	611	630	-	-
	Lomi1g00336	667	PRINTS	Endopeptidase La (Lon) serine protease (S16) signature	209	228	-	-
	Lomi1g00336	667	Gene3D	-	182	346	IPR027417	-
	Lomi1g00336	667	MobiDBLite	consensus disorder prediction	628	667	-	-
	Lomi1g00336	667	CDD	AAA	202	291	-	-
	Lomi1g00336	667	PANTHER	KINASE-RELATED	81	586	-	GO:0009507(PANTHER)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lomi1g00336	-	-

Event-related genes

Select	Gene_1	Gene_2	Event_name
	324105	Lomi2g04330	Lomi1g00336
	333372	Lomi1g00336	Lomi2g04330

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Lomi	Lomi-Chr12:5373722	Lomi1g00336	Lomi-Chr1:2905782	dispersed
	Lomi	Lomi-Chr1:2905782	Lomi9g01720	Lomi-Chr9:29303932	dispersed
	Lomi	Lomi-Chr12:23246816	Lomi1g00336	Lomi-Chr1:2905782	transposed
	Lomi	Lomi-Chr1:2905782	Lomi2g04330	Lomi-Chr2:48681516	wgd