Gene detail

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Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lomi1g00361	ATGATCCCCAAGTCAGTGTGTACTGGTTCTTCAGATCACGCTCCATTTGTGATGTCAACCAAATCATGGATTTTGCATGGCGTCGCCGTCGCCGCTTCTCTTGCCGTCGGTGCTCACGCTTACTTTTTCTACCGTCGATCTGCCACCGTCTTTCGGAGCCGGGTTGTCGGCATAATTCCGGCCCGATTCGCTTCTTCCCGGTTTCAGGGTAAACCCCTTGTTGAAATCCTTGGCAAACCTATGATCCAGAGAACTTGGGAGAGAGCAAAGTTGGCAACAACATTGGATTGTGTTGTTGTGGCCACGGATGATGAAAAGATTGCAGAATGCTGTCGAGGATTTGGTGCGGAAGTGATAATGACTGCAGAGTCGTGCAGAAACGGTGCCGAGAGGTGTAGTGAAGCACTTCAAAAACTCAAGAAAAAGTATGATATTGTTGTCAATATTCAAGGTGACGAACCTCTTATTGAACCTGAAATCATTGATGGCATTGTCAAAGCTCTTCAGACCACCCCGGATGCAGTTTTTAGCACTGCAGTCACATCTTTGAAACCTGAAGATGCTTTTGATCCAAATCGTGTGAAATGTGTGGTCGATAACCGTGGTTATGCAATCTACTTTTCTCGGGGGCTGATTCCTTTTAACAAGTCAGGGAAAGTTAATTCTGAATTCCCGTATAATCTTCATCTCGGTATTCAGAGCTATGACTCAGAATTTCTAAAAATTTATCCTAACCTGACACCAACTCCGTTGCAACTAGAAGAAGATTTAGAACAGCTTAAAGTTCTTGAAAATGGCTACAAAATGAAGGTGATTAAAGTGGATCATGATGCTCACGGTGTTGATACTCCAGAAGATGTCGCCAAGATTGAAAATTTTATGCGCGAAAGGAACTTGTCATAG	903	43.96	MIPKSVCTGSSDHAPFVMSTKSWILHGVAVAASLAVGAHAYFFYRRSATVFRSRVVGIIPARFASSRFQGKPLVEILGKPMIQRTWERAKLATTLDCVVVATDDEKIAECCRGFGAEVIMTAESCRNGAERCSEALQKLKKKYDIVVNIQGDEPLIEPEIIDGIVKALQTTPDAVFSTAVTSLKPEDAFDPNRVKCVVDNRGYAIYFSRGLIPFNKSGKVNSEFPYNLHLGIQSYDSEFLKIYPNLTPTPLQLEEDLEQLKVLENGYKMKVIKVDHDAHGVDTPEDVAKIENFMRERNLS	300

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lomi1g00361	300	Gene3D	Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A	45	295	IPR029044	-
	Lomi1g00361	300	CDD	CMP-KDO-Synthetase	54	291	IPR004528	GO:0008690(InterPro)
	Lomi1g00361	300	PANTHER	3-DEOXY-MANNO-OCTULOSONATE CYTIDYLYLTRANSFERASE	14	299	-	GO:0005829(PANTHER)\|GO:0008690(PANTHER)
	Lomi1g00361	300	NCBIfam	3-deoxy-manno-octulosonate cytidylyltransferase	57	287	IPR004528	GO:0008690(InterPro)
	Lomi1g00361	300	Hamap	8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB].	53	295	IPR004528	GO:0008690(InterPro)
	Lomi1g00361	300	FunFam	3-deoxy-manno-octulosonate cytidylyltransferase	53	295	-	-
	Lomi1g00361	300	SUPERFAMILY	Nucleotide-diphospho-sugar transferases	55	297	IPR029044	-
	Lomi1g00361	300	Pfam	Cytidylyltransferase	56	268	IPR003329	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lomi1g00361	K00979	3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]

Event-related genes

Select	Gene_1	Gene_2	Event_name
	324118	Lomi2g04300	Lomi1g00361
	333359	Lomi1g00361	Lomi2g04300

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Lomi	Lomi-Chr1:3203192	Lomi1g02410	Lomi-Chr1:36210288	dispersed
	Lomi	Lomi-Chr7:34905747	Lomi1g00361	Lomi-Chr1:3203192	transposed
	Lomi	Lomi-Chr1:3203192	Lomi2g04300	Lomi-Chr2:48426583	wgd