Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lomi1g00373 | ATGACTCATAAAGAGGAGACTCTGATTGGTTCGGGAACACTTGTAGCGATTACGGTTATCTTATCATTGAAGTTGTTTAATGATCATGTTAATAATTGGAAGAGACCCAAGGAGCAAAAGGCCATCTTAGTGATTATTTGTATGGCACCAATTTATGCTATTGATTCATATGTTGGACTGCTTGATATTCGTGGCAGTGAGACATTTTTCGTGTTGTTGGATTCGATCAAAGAATGCTACGAGGGTCTGGTGATGGCTAAGTTCTTGGCTTTGTTGTACACTTATTTGAATATATCGATAAGCAAAAACATAGTCCCGGATGAGATCAAAGGAAGAGAAATCCATCACTCGTTTCCCATGACTCTCTTCCAACCTCATTCAGTTCGCTTGAACCATCAAAACCTGAAGCTCCTTAAGTACTGGACATGGCAGTTTGTAGTGATTCGCCCTGTGTGTTCTGTCTTGATGATAGTTCTACAACTCCTTGAGATATATCCTGATTGGCTTAGCTGGACATTCACTATGATCTTGAATGTATCCGTTTCATTGGCATTATACGCTCTTGTGGTTTTCTACCATGTGTTTGCTAAAGAATTAGCACCACATAAGCCTCTTGCCAAATTCTTATGTGTCAAGGGGATCGTCTTCTTCTGCTTTTGGCAGGGAATTGTACTCAGTGGTCTCGTGGCAGTGGGTGTAATTAAATCAAATCATTTTTGGCTTGATGTGTCACATATCCAACAAGCGCTGCAAAACGCGCTGGTGATAGTGGAGATGGTGTTTTTTGCCATCTTTCAGATGTATGCATACACTGCTGCACCATACAAGGTGGCTGATGTGAAAGAAAAGAAGAAAGAGTGA | 861 | 40.77 | MTHKEETLIGSGTLVAITVILSLKLFNDHVNNWKRPKEQKAILVIICMAPIYAIDSYVGLLDIRGSETFFVLLDSIKECYEGLVMAKFLALLYTYLNISISKNIVPDEIKGREIHHSFPMTLFQPHSVRLNHQNLKLLKYWTWQFVVIRPVCSVLMIVLQLLEIYPDWLSWTFTMILNVSVSLALYALVVFYHVFAKELAPHKPLAKFLCVKGIVFFCFWQGIVLSGLVAVGVIKSNHFWLDVSHIQQALQNALVIVEMVFFAIFQMYAYTAAPYKVADVKEKKKE | 286 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lomi1g00373 | 286 | Pfam | Organic solute transporter Ostalpha | 8 | 275 | IPR005178 | - | |
| Lomi1g00373 | 286 | SMART | Solute-trans-a-2 | 7 | 275 | IPR005178 | - | |
| Lomi1g00373 | 286 | PANTHER | ORGANIC SOLUTE TRANSPORTER-RELATED | 8 | 279 | IPR005178 | GO:0005215(PANTHER)|GO:0006810(PANTHER)|GO:0016021(PANTHER) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lomi1g00373 | K14360 | organic solute transporter subunit alpha |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 324125 | Lomi2g04284 | Lomi1g00373 | |
| 333352 | Lomi1g00373 | Lomi2g04284 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Lomi | Lomi-Chr13:10943393 | Lomi1g00373 | Lomi-Chr1:3346869 | dispersed | |
| Lomi | Lomi-Chr14:7505672 | Lomi1g00373 | Lomi-Chr1:3346869 | dispersed | |
| Lomi | Lomi-Chr1:3346869 | Lomi3g01987 | Lomi-Chr3:17170245 | dispersed | |
| Lomi | Lomi-Chr1:3346869 | Lomi2g04284 | Lomi-Chr2:48296549 | wgd |