AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lomi1g00398 ATGGGTGGTGGAGTAGCGATAAGAGCAGCTGCGAAAGCAGCCGGAATCGGTGTATTGAACACCGGTCTTCGCGGCAGTGAAAACCCTGTCGTTTCCGCCGCTCGACAAGCCAGTCGTTCTGTCGCAGCGTCGGTGGTTTCATCTTCAGATGATTTGAAATTGATGATCAATAATAATAATAATAATGATGATTGTAAATCGAGTTCATCGGTTGAGAAGCCGTTTGATGATTGGGAATTTGCTGAAGATGAACTTTTTATGGAAGCCGGTGAGCCGATGCCGAGATTGGTGTTTGGTGGTGCTCCTAGTATTCAGGAAGCTAAACAGGCTACTTCTGATCTCAATTATGCTCTTGAAAAGACTTACCTGTATTCGAATGCAACTAGTGGACAAATGGGACATGTGGAGACTGAACCATGTCTTGTTAGTGAAACATTGGTAACCCCTTTAGCATCAAAGCAAGCAATTCATGCTTTTAGGCTTCTTAATGAAAATCCTAAAGCTCAGAGTGTTGTTGCTTCAATTGCTTGTGATCCAAATGTGTGGAATGCTGTTCTGCAAAACGCCGAGCTTCAGGATTTTCTTCATACCCATAAGACCGATGTCGTGTTACCAGACATGGAGTCAAAGGTGAATGATTCGTCTGATGAGAGCCCAAAACCAAGTGAATCCAAATCTGTATCTGGGAAACGTCTCATGGATTATGTGGAGGACATTAAGCAAAAAATCACTGTTACAGTTGTTGACATGATGAACAGCTTATCGGATACCTTCCAGACCCTTTTTGGTGGTTCGCCAAAAGACGTATTTACTGTGAACCCAGATGGATCTGCTGAAATGTCTGTGGAGAAGACAGCAATTGGAGCAACTTTTATGGGATTGGCAATCATGGTTATCGCTGTCGTTGTTCTTAAACGCCCAGCCTTCTAG 930 43.55 MGGGVAIRAAAKAAGIGVLNTGLRGSENPVVSAARQASRSVAASVVSSSDDLKLMINNNNNNDDCKSSSSVEKPFDDWEFAEDELFMEAGEPMPRLVFGGAPSIQEAKQATSDLNYALEKTYLYSNATSGQMGHVETEPCLVSETLVTPLASKQAIHAFRLLNENPKAQSVVASIACDPNVWNAVLQNAELQDFLHTHKTDVVLPDMESKVNDSSDESPKPSESKSVSGKRLMDYVEDIKQKITVTVVDMMNSLSDTFQTLFGGSPKDVFTVNPDGSAEMSVEKTAIGATFMGLAIMVIAVVVLKRPAF 309
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lomi1g00398 309 PANTHER OS08G0179900 PROTEIN 1 306 - -
Lomi1g00398 309 MobiDBLite consensus disorder prediction 209 224 - -
Lomi1g00398 309 MobiDBLite consensus disorder prediction 209 229 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lomi1g00398 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
324133 Lomi2g04267 Lomi1g00398
333344 Lomi1g00398 Lomi2g04267
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
3854281 Lomi Lomi1g00398 Lomi-Chr1:3602490 Lomi2g04267 Lomi-Chr2:48039986