Gene detail

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Species

Gene ID

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Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lomi1g00418	ATGGCAACAACCAAATCATTGAAATATAAGAAACCCCCAGCAACACCATCACCACCACCATCAGCATCAAGATCTTCATCACTATCATCCCATCTCGCCATGATTGAACTCAAACAAAGAATCTTAACATCAATTTCCAAACTTTCCGACCGAGACACCCACCAAATCGCCGTTGAAGATCTTGAAAAAATCATTCAAACCCTTTCACCAGATGGCATCACAATGCTTCTTAACTCACTATACGATGCAACAAGTGACAGCAACAAACCGGCGGTTAAAAAAGAATCAATTCGCCTTCTTTACTTCTTATGTGCAACTCATACTGAGTTAGCATCTACTCATTTGATAAAGATTATAGCCCACATTGCTAAAAGGCTTAAAGACTCTGATTCAGGTGTGAAAGACACGTGTCGTGATGCAATTGGACAACTTTCTTGTTTGTATTTGAAAGGGGAAAATGGGGTTGCTGTTGAGAATAATAATAATATTGGGTCTGTTGTTACTTTGTTTGTGAAGCCATTATTTGAAGCTTTGAATGATCAGAATAAAGGGGTTCAAGCTGGTTCAGCAATGTGTTTGGCTAAAATGGTGGAAATGGCTTCTGACCCACCTATTTTGGCTTTTCAGAAGCTTTGTGCTAGGATCTGCAAGTATCTTAACAACCCTAATTTCTTAGCTAAAGGTGCACTTTTGCAAGTGGTTTCTAGTCTTTCTCAGGTTGGTGCTATTTCTCCGCAAGGCTTGGAGCCACTGCTTCAAAGTATTCACGACTGTCTTAGCAATTCTGATTGGGCAACTCGAAAAGCAGCCGCTGATGCATTGAATGCTTTGGCTTTGCATTCAAGCAACTTAATCACAGGAAAGACAGGGCCTACTATAACCGCCCTGGAGGCTTGCCGCTTTGATAAGATAAAACCTGCAAGAGACAGTATAATAGAAGCTTTGCAACAATGGCAAGGTCTTTCAGGAGGTTTTGAATATCAGAAAGCATCTGGTCATGATGGTAAAGATTCTGAACCACTTAAGTCGGATGAAAGAAAAACAGAGGCCCCACCAAAGAATGATGAACCCGAGGGTAGTAACATACCTGAGAAGGCCGCTGGAATCTTGAAAAAGAAAGCACCTGCTTTGAGTGATAAAGAACTAAACCCTGAGTTCTTTCAAAGACTTGAAAGACGGGTTTCTGGTGAAGTTGAAGTGGTCGTCCCTCGAAGATTTGTGAGGTCCTCTAATGAGCAAAATGGAGAAGAGTCAAGCCTTAATGACACAGATGCCGGTTCACAGTCAAAAGAGAGCTACCAAAAAGTGGATCGAGGAATCAGTGGTCCTTCTAGAAGGCGAGAATTTGAAGATATGAATGACCCGAGTCAAAGGGAGGGATTTAGGAATAATAAAGGAAATTGGTTGGCTATTCAGAGGCAATTACTACAACTGGAGAGGCAACAGGCTCATCTCATGAACATGTTGCAGGATTTCATGGGTGGATCTCATGATGGCATGTTGACTCTGGAGAACAGAGTGCGGGGTCTTGAGCGAGTAGTTGAAGACATGGCACGTGATCTGTCACTATCAGGTAATAACCGAAGAGGTGGAAATTATATGATGGGATTTGAGGAATCGGGTAGACCATTAGGCAAGTACAACGGCTTTTCCGATTATCCCAATACCAAATTAGGTAGGAATGATGACCCGATTTCTTACATGGGTTCAAGTATGAGGGGTAGAGGATCTTCATGGAGAGCAGACGGACCTGAAAGTTGGGACTACCCTTCATATGGGGGCAGAAACCCGCAGATGGGTTTAAGGAGAGGTATGGATGGTAGATCACCTAAATCTGAAAATGAGACTGAACCCGTTAATAGGAGAGGTTGGGGGGATAAAGCGTCTGGGCCTGCTAGGTTTGGGGAGGGCCCCTCGGCTAGAAGTGTTTGGCAAGCTTCGAAAGATGAAGCTACATTGGAAGCAATTAGGGTGGCGGGTGACGACAACGGGCCTGCTAGAACTCCCCGAGTAGCAGTTCCTGAAATGACTGCTGAAGCAATGGGTGATGAGAATGTGCAGGATCGGGACCCAGTTTGGACGGCTTGGAGTAATGCCATGGATGCACTTCATGTGGGTGATGCTGATACGGCTTTTGCTGAAGTTTTGTCCACGGGAGATGATTTATTACTTGTGAAGCTAATGGACAGAACGGGCCCGGTAATTGATCAGCTCTCAAGCGAAGTCGGGACTGAAGTTCTGCATGCTGTTGCCCAGTTTCTTCCTGACCAAAACGTGTTTGATATCTGTTTGTCCTGGCTTCAACAGTTGCTCGATATGATTGTAGAGAATGGAACAGATAATGTGGAACTCCCAGTGGAATTAAAAAAGGAGATTTTGGTGAATTTAAATGAGGCAGCTTCAACTATCGAACCACCTGAAGACTGGGAAGGCATGGTGCCAGACCAACTTTTGTTGCAGTTGGCATCTGCATGGAATTTTGATCTGCATCAGCTAGACAAGTGA	2505	43.99	MATTKSLKYKKPPATPSPPPSASRSSSLSSHLAMIELKQRILTSISKLSDRDTHQIAVEDLEKIIQTLSPDGITMLLNSLYDATSDSNKPAVKKESIRLLYFLCATHTELASTHLIKIIAHIAKRLKDSDSGVKDTCRDAIGQLSCLYLKGENGVAVENNNNIGSVVTLFVKPLFEALNDQNKGVQAGSAMCLAKMVEMASDPPILAFQKLCARICKYLNNPNFLAKGALLQVVSSLSQVGAISPQGLEPLLQSIHDCLSNSDWATRKAAADALNALALHSSNLITGKTGPTITALEACRFDKIKPARDSIIEALQQWQGLSGGFEYQKASGHDGKDSEPLKSDERKTEAPPKNDEPEGSNIPEKAAGILKKKAPALSDKELNPEFFQRLERRVSGEVEVVVPRRFVRSSNEQNGEESSLNDTDAGSQSKESYQKVDRGISGPSRRREFEDMNDPSQREGFRNNKGNWLAIQRQLLQLERQQAHLMNMLQDFMGGSHDGMLTLENRVRGLERVVEDMARDLSLSGNNRRGGNYMMGFEESGRPLGKYNGFSDYPNTKLGRNDDPISYMGSSMRGRGSSWRADGPESWDYPSYGGRNPQMGLRRGMDGRSPKSENETEPVNRRGWGDKASGPARFGEGPSARSVWQASKDEATLEAIRVAGDDNGPARTPRVAVPEMTAEAMGDENVQDRDPVWTAWSNAMDALHVGDADTAFAEVLSTGDDLLLVKLMDRTGPVIDQLSSEVGTEVLHAVAQFLPDQNVFDICLSWLQQLLDMIVENGTDNVELPVELKKEILVNLNEAASTIEPPEDWEGMVPDQLLLQLASAWNFDLHQLDK	834

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lomi1g00418	834	MobiDBLite	consensus disorder prediction	409	435	-	-
	Lomi1g00418	834	MobiDBLite	consensus disorder prediction	606	622	-	-
	Lomi1g00418	834	SMART	TOG-3	60	310	IPR034085	-
	Lomi1g00418	834	MobiDBLite	consensus disorder prediction	440	458	-	-
	Lomi1g00418	834	Gene3D	-	26	150	IPR011989	-
	Lomi1g00418	834	MobiDBLite	consensus disorder prediction	330	360	-	-
	Lomi1g00418	834	PANTHER	MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1	24	826	IPR033337	GO:0005874(InterPro)\|GO:0007275(PANTHER)\|GO:0008017(InterPro)\|GO:0008017(PANTHER)\|GO:0009826(PANTHER)\|GO:0010005(PANTHER)\|GO:0010031(PANTHER)
	Lomi1g00418	834	Coils	Coil	500	520	-	-
	Lomi1g00418	834	MobiDBLite	consensus disorder prediction	326	363	-	-
	Lomi1g00418	834	MobiDBLite	consensus disorder prediction	409	464	-	-
	Lomi1g00418	834	MobiDBLite	consensus disorder prediction	1	28	-	-
	Lomi1g00418	834	MobiDBLite	consensus disorder prediction	589	642	-	-
	Lomi1g00418	834	Gene3D	-	154	305	IPR011989	-
	Lomi1g00418	834	SUPERFAMILY	ARM repeat	39	801	IPR016024	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lomi1g00418	K28093	microtubule-associated protein TORTIFOLIA1 and related proteins

Event-related genes

Select	Gene_1	Gene_2	Event_name
	121263	Lomi1g00418	Lomi7g00263
	324145	Lomi2g04235	Lomi1g00418
	333332	Lomi1g00418	Lomi2g04235

Duplication type information

Select	Gene1	Location1	Gene2	Location2	E-value	Duplicated-type
	3821800	Lomi	Lomi1g00418	Lomi-Chr1:3793504	Lomi3g00403	Lomi-Chr3:3465353
	3854297	Lomi	Lomi1g00418	Lomi-Chr1:3793504	Lomi2g04235	Lomi-Chr2:47776007
	3858341	Lomi	Lomi1g00418	Lomi-Chr1:3793504	Lomi7g00263	Lomi-Chr7:2572167