AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lomi1g00429 ATGGACCCAGCAAACCAAGAAGTAGCACCTGATGTATCACTAATGGCTCCTGAAAAACGAAAACGTGGTCGCCCACGAAAGGATCCTAGTGAACGACGAGCGCAAAGAGCGCGTTCGCAAGCTGCTGCTCGCATGCCTCCTGGTTTGATACAGACAAACAACACTCAACGGGTTGACCCAATCAATGATCCAAATGAAGTTATGATTGGACAGACTATCACTGGTGTTGTTGAAGCAACTTTTGATGCTGGTTACCTGCTCGCTGTCAGGATTGGGAACTCAAGTATCACATTAAGGGGTGCAGTTTTCAAACCGGGCCACACTGCTCCCGTGACTCCAGAAAATGACGTGGCACCTCATGCTGAAATGATTAAAAGGACTGAAATTCCATTCCCAACAGAACTTCTTCCTAAACGTAGACGTAAACGACGCTCAAAAGAGAAAAATATGCAGCTTGTTACGTATGTTGGAAATGGGGTTGACCAGGGTCTTCAAAATTCATCATCTACAGGGAACTACGTTCTAGCCCCCTCGGTTCCACCAGTTGGTGCGAGAGGAACCGTGGTCCCAGTCGTCCTTCAACCACTGAATTTGTCAAATGGTCTATCGACCAATCAACCTGCTCCTCATTTGAGGGCCTCACAAGGCAAGCCGGTACACTCAGTTTTGCCGTTGGCTGTTTGCCCACCGAATGGTTCAACAAGCCAAGCATCTGAGTCTCAAACTAGCTCCCAATTTACAGTTACACCCACGGGGTCTGGAAATGAAAATGCTTCTTTCAAACAAGCGGAAGGGGCTAAGTCAATAAAATCACATGATGTGCAGGAGCGAGTTGTAAAAACAGAATCGGACATTGGGGACATGAATGAGCCTCTTTTTGTTGAACCTCTGCAAACTCGACATACAGTTCACCATTTCCAACCTCCACAAGTAATGGGAGCTGTCATGCATAGTGGACCTGGGAGGATGACAGAACTATTGCAGGCTGTTCAGCAGAACATCGGTGATGACCAGGGTGCTCGAAATGGACATCAAGCTGGAGCTTATAATGTGAGTCGTAGCAGAGACGAGGAAACTGGTCAGGCGGCGGGAAGGATGTAA 1101 47.68 MDPANQEVAPDVSLMAPEKRKRGRPRKDPSERRAQRARSQAAARMPPGLIQTNNTQRVDPINDPNEVMIGQTITGVVEATFDAGYLLAVRIGNSSITLRGAVFKPGHTAPVTPENDVAPHAEMIKRTEIPFPTELLPKRRRKRRSKEKNMQLVTYVGNGVDQGLQNSSSTGNYVLAPSVPPVGARGTVVPVVLQPLNLSNGLSTNQPAPHLRASQGKPVHSVLPLAVCPPNGSTSQASESQTSSQFTVTPTGSGNENASFKQAEGAKSIKSHDVQERVVKTESDIGDMNEPLFVEPLQTRHTVHHFQPPQVMGAVMHSGPGRMTELLQAVQQNIGDDQGARNGHQAGAYNVSRSRDEETGQAAGRM 366
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lomi1g00429 366 MobiDBLite consensus disorder prediction 230 256 - -
Lomi1g00429 366 MobiDBLite consensus disorder prediction 14 38 - -
Lomi1g00429 366 MobiDBLite consensus disorder prediction 336 366 - -
Lomi1g00429 366 MobiDBLite consensus disorder prediction 336 357 - -
Lomi1g00429 366 PANTHER AT HOOK MOTIF-CONTAINING PROTEIN 1 342 IPR045881 -
Lomi1g00429 366 MobiDBLite consensus disorder prediction 1 43 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lomi1g00429 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
324153 Lomi2g04218 Lomi1g00429
333324 Lomi1g00429 Lomi2g04218
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
3854305 Lomi Lomi1g00429 Lomi-Chr1:3885971 Lomi2g04218 Lomi-Chr2:47671131