Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lomi1g00445 | ATGCATTCCGAGAGCGGTTTCTGGAGGCCAAAGCCTGATGGAACTATTGAGGTTGTCATTGCTCAAAGTACTGGTCTTGTTGAAGTTCAGAAAGGAACATATGATGCAGAAAAGAAAGTTGTGAAGCTTCAAAGTGAGCTTGTTGGAAATGCTTCTAAGGTTAAAGAGATCTCTCGAGTTTTTAATATGGTTGATAACGAGCTATCTTATGCGGTTGAGATGGCTACCAATCTCACCAGTCGTCAGCCTCATCTGAAAGCGTCGCTCAAGAAGCTCTAA | 279 | 42.65 | MHSESGFWRPKPDGTIEVVIAQSTGLVEVQKGTYDAEKKVVKLQSELVGNASKVKEISRVFNMVDNELSYAVEMATNLTSRQPHLKASLKKL | 92 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lomi1g00445 | 92 | Gene3D | - | 1 | 92 | IPR012674 | - | |
| Lomi1g00445 | 92 | Pfam | THAP4-like, heme-binding beta-barrel domain | 1 | 91 | IPR014878 | - | |
| Lomi1g00445 | 92 | PANTHER | THAP4 PROTEIN | 1 | 92 | IPR045165 | - | |
| Lomi1g00445 | 92 | SUPERFAMILY | Lipocalins | 1 | 91 | IPR012674 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lomi1g00445 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 324166 | Lomi2g04199 | Lomi1g00445 | |
| 333311 | Lomi1g00445 | Lomi2g04199 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Lomi | Lomi-Chr1:4055001 | Lomi2g04199 | Lomi-Chr2:47509818 | wgd |