Gene detail

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Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lomi1g00452	ATGGAGGAGCATTGCACTGATAAGTGTTCTCCTTGTACGGTTAACGCACACAATTCTTCATCGTGGAGACTTGATATTAATCACTTTCGATTACCACAATCTTCTTCAGGCGATCGTGAATCTTCCACTCTTCGAAGATTGCTTCAACCTACTCCAAAAAAACAAATAAAAGTTGAAGCATATTACAAGAAACAGGAAGAGCTATTTGAAGGATTCAATGAGATGGAAATAATGAGCAAATCAGATTTTTTACCTGGAGCCCTAACTGAGGAGTATGTAACACAATTGTGTTACTATGTACAGGATGAAATGAAGAATCTTGCTCGCAGTGAGAGAATGGCAATCTATGTATCCAACATAGCTAACTTGGTTCTGTTCATCGCTAAAGTTTATGCGTCCTATGAGAGTAGATCGTTAGCAGTTATTGCATCAACTTTGGATTCATTTTTGGACTTGTTATCCGGATTTATTCTATGGTTTACTTCAAATGCCATGAGAAATCCTAATCAGTATCATTATCCAATCGGAAAGAATAGGATGCAACCCGTTGGGATCATTGTTTTTGCATCAGTAATGGCGACACTTGGTTTCCAAATATTGCTCGAGTCCGCAAGAGAAATTATTGCTAGGACTCACCCTAACAAGGATCATGACAATGAAATGTGGGTGATTGGTATCATGGTGTTTGTGACAGTAGTCAAGTTTATTCTGATGGTTTATTGTCGAAGATTTGAAAATGAAATAGTGAGAGCCTACGCTCAAGATCATTTCTTCGATGTCATCACAAATTCAGTTGGGTTAGCCGCTACTGTCTTAGCCATACGTTACAAATGGTGGATTGATCCCGTTGGGGCTATAATTATAGCGTTCTATACTATAAATACATGGGCAAAGACGGTTATAGAGAATGTATGGTCGTTAATTGGGAGAACGGCTCCACCTGAATTCTTGGCGAAATTGACATATTTGGTTTGGAACCATCACGAAGAAATAAAACACATTGATACAGTAAGAGCGTATACATTCGGAACTCACTACTTTGTAGAAGTAGATATAGTGTTGCCCAAAGATATGATGCTTAGTGAGGCACATAATATTGGCGAAATGTTGCAAATAAAACTAGAGCAATTAGCAGAAGTTGAACGAGCGTTTGTTCATATCGATTTTGAGTTCACTCATGCACCTGAACACAAAGGGAAGGTTTGA	1206	38.39	MEEHCTDKCSPCTVNAHNSSSWRLDINHFRLPQSSSGDRESSTLRRLLQPTPKKQIKVEAYYKKQEELFEGFNEMEIMSKSDFLPGALTEEYVTQLCYYVQDEMKNLARSERMAIYVSNIANLVLFIAKVYASYESRSLAVIASTLDSFLDLLSGFILWFTSNAMRNPNQYHYPIGKNRMQPVGIIVFASVMATLGFQILLESAREIIARTHPNKDHDNEMWVIGIMVFVTVVKFILMVYCRRFENEIVRAYAQDHFFDVITNSVGLAATVLAIRYKWWIDPVGAIIIAFYTINTWAKTVIENVWSLIGRTAPPEFLAKLTYLVWNHHEEIKHIDTVRAYTFGTHYFVEVDIVLPKDMMLSEAHNIGEMLQIKLEQLAEVERAFVHIDFEFTHAPEHKGKV	401

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lomi1g00452	401	PANTHER	MITOCHONDRIAL METAL TRANSPORTER 1-RELATED	18	398	IPR050291	GO:0008324(PANTHER)\|GO:0016020(PANTHER)
	Lomi1g00452	401	Gene3D	Cation efflux protein, cytoplasmic domain	311	389	IPR036837	-
	Lomi1g00452	401	NCBIfam	cation diffusion facilitator family transporter	114	388	IPR002524	GO:0006812(InterPro)\|GO:0008324(InterPro)\|GO:0016020(InterPro)\|GO:0055085(InterPro)
	Lomi1g00452	401	Pfam	Dimerisation domain of Zinc Transporter	313	388	IPR027470	-
	Lomi1g00452	401	Pfam	Cation efflux family	116	307	IPR002524	GO:0006812(InterPro)\|GO:0008324(InterPro)\|GO:0016020(InterPro)\|GO:0055085(InterPro)
	Lomi1g00452	401	FunFam	Metal tolerance protein 11	114	307	-	-
	Lomi1g00452	401	FunFam	Metal tolerance protein 11	310	390	-	-
	Lomi1g00452	401	Gene3D	Cation efflux protein transmembrane domain	112	307	IPR027469	-
	Lomi1g00452	401	SUPERFAMILY	Cation efflux protein cytoplasmic domain-like	312	388	IPR036837	-
	Lomi1g00452	401	SUPERFAMILY	Cation efflux protein transmembrane domain-like	110	309	IPR027469	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lomi1g00452	-	-

Event-related genes

Select	Gene_1	Gene_2	Event_name
	121272	Lomi1g00452	Lomi5g01855
	324172	Lomi2g04190	Lomi1g00452
	333305	Lomi1g00452	Lomi2g04190

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Lomi	Lomi-Chr11:26289784	Lomi1g00452	Lomi-Chr1:4096186	dispersed
	Lomi	Lomi-Chr1:4096186	Lomi9g01765	Lomi-Chr9:29784867	dispersed
	Lomi	Lomi-Chr1:4096186	Lomi2g04190	Lomi-Chr2:47459907	wgd