Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lomi1g00453	ATGAACAAATTGGGAAGAGGGCACCGGGACAAGATTCAGCAGTTTATGACCATTACTGGAGCAAGTGAAAAGGTTGCTCTCCAAGCATTAAAGACCAGTGATTGGCATCTTGATGGAGCGTTTGATATCTTCTACAGCCAGCCTCATCCTAAATCATCATATACAGATACAAGGCATATAGAGGAATTTTACAATAAATACAAAGATCCTTATGCTGATATGATTATGGCTGATGGTATTAGTACTCTCTGCAATGACCTTCAGGTGGATCCGCAAGATATTGTTATGTTGGTTGTTTCATGGCACATGAAAGCTGCTACCATGTGTGAATTTTCAAAGCAGGAATTTGTTGGTGGCTTGCAGTCTCTTGGGGTAGATTCATTGGAGAAATTCCGTGAAAAGATACCATTTATGCGGTCTGAGCTGAAAGATGAGCAAAAGTTCAAGGAGATATATATTTTTGCATTTGGCTGGGCAAAAGAAAAGGGTCAGAAGTCTCTGGCACTGGATACAGCAATAGGAATGTGGCAATTGTTGTTTGAAGAAAAGCAGTGGCCATTGGTTGAGCATTGGTGCCAGTTCTTACAGGCACGGCATAACAAAGCTATTTCTCGGGACACTTGGTCTCAACTATTGGAATTTGCAAGAAGTGTGGATCCTACCCTATCAAATTACGATGCTGAAGGTGCTTGGCCATATCTTATTGATGAATTTGTAGAGTACCTGACAGAGAATGGCATAATTCAACAAAAGCCCCGTGTGCTCGATTTGCTTGGCCGTGTCTAA	786	41.6	MNKLGRGHRDKIQQFMTITGASEKVALQALKTSDWHLDGAFDIFYSQPHPKSSYTDTRHIEEFYNKYKDPYADMIMADGISTLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFVGGLQSLGVDSLEKFREKIPFMRSELKDEQKFKEIYIFAFGWAKEKGQKSLALDTAIGMWQLLFEEKQWPLVEHWCQFLQARHNKAISRDTWSQLLEFARSVDPTLSNYDAEGAWPYLIDEFVEYLTENGIIQQKPRVLDLLGRV	261

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lomi1g00453	261	Gene3D	-	53	143	-	-
	Lomi1g00453	261	Pfam	Cullin binding	131	241	IPR005176	-
	Lomi1g00453	261	PANTHER	RP42 RELATED	24	245	IPR014764	GO:0000151(PANTHER)\|GO:0031624(PANTHER)\|GO:0032182(PANTHER)\|GO:0045116(PANTHER)\|GO:0097602(PANTHER)
	Lomi1g00453	261	Pfam	UBA-like domain	9	47	-	-
	Lomi1g00453	261	Gene3D	Cullin, PONY binding domain	144	251	IPR042460	-
	Lomi1g00453	261	Gene3D	-	6	47	-	-
	Lomi1g00453	261	CDD	UBA-DCNL	8	48	-	-
	Lomi1g00453	261	FunFam	Defective in cullin neddylation protein	54	143	-	-
	Lomi1g00453	261	ProSiteProfiles	DCUN1 domain profile.	55	243	IPR005176	-
	Lomi1g00453	261	FunFam	Defective in cullin neddylation protein	144	249	-	-
	Lomi1g00453	261	SUPERFAMILY	UBA-like	7	46	IPR009060	GO:0005515(InterPro)
	Lomi1g00453	261	FunFam	Defective in cullin neddylation protein	6	47	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lomi1g00453	K17822	DCN1-like protein 1/2

Event-related genes

Select	Gene_1	Gene_2	Event_name
	121273	Lomi1g00453	Lomi5g01856
	324173	Lomi2g04189	Lomi1g00453
	333304	Lomi1g00453	Lomi2g04189

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Lomi	Lomi-Chr1:4101817	Lomi5g01856	Lomi-Chr5:30016907	dispersed
	Lomi	Lomi-Chr1:4101817	Lomi2g04189	Lomi-Chr2:47452225	wgd