AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lomi1g00501 ATGGCTATTTTCGCGGCAAAATTAAATTATGGCTCTGAATTGAAGCTTCAGTCTCGAGTGTTCATGAATCCGTGGGCAACGAAGGTTATAATAGTTCGTTGTTGTTCGAATTTGGGGGAAAGCTCTACGAATTTTCCAGTTAGGTACACTCCTAAGAAATCTTCACAATATAATAAACCTTACGATTTTGTTCCAAAGGACTCCGAGAATTATGAAGTGCGTCGCAGTCGATTCAGAAACCCTAATTTGACGAGTGTTACTTTAGACACGTCAAAGGATGATGATTTTAATTCAGGGAATTTAAGATCAAAAGAAAATAAATTTTGTAATTCAGATACGAGGTTAAAGCCTACGAAAGAACTTCATGATTTTGATGACATGGATGGTTATGAGGAGGGTATAGATGATGAACTTGACTTTGATAATGGAAATTACGAAGTTACAAGTCTGGAATTTGAGCCTAGTAAAATTAAAGAAGCTGAGAAGACAGCGATTGGATTGCTTGCTGCAAGAGCATATATGGCACTCGAGCTGAAGAAGAAACTGCTAGGAAAGAAGTTCCTGCTTCAAGTTGCTAATGCTGTGATTTCTGACTTCCAGACAGGCCTTGACTAA 615 38.05 MAIFAAKLNYGSELKLQSRVFMNPWATKVIIVRCCSNLGESSTNFPVRYTPKKSSQYNKPYDFVPKDSENYEVRRSRFRNPNLTSVTLDTSKDDDFNSGNLRSKENKFCNSDTRLKPTKELHDFDDMDGYEEGIDDELDFDNGNYEVTSLEFEPSKIKEAEKTAIGLLAARAYMALELKKKLLGKKFLLQVANAVISDFQTGLD 204
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lomi1g00501 204 PANTHER REGULATORY PROTEIN RECX FAMILY PROTEIN 14 200 IPR003783 GO:0006282(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lomi1g00501 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
324179 Lomi2g04127 Lomi1g00501
333298 Lomi1g00501 Lomi2g04127
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Lomi Lomi-Chr1:4740689 Lomi2g04127 Lomi-Chr2:46921523 wgd