AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lomi1g00529 ATGGGATGGTCGTCAGCTGCTACTTTATCAATTGGAGGAGGAAGAGGTGTTGATAATTTGGTGGCATGGAACTTGTTACAGTCGCATCATCATCATCATCATGATTATGATTACGGTCAACGAGTTTTCAACAAAAGTCGTTGTTTGACTTCACACCACTACACTCCGATTAGTCATGGTGTTGTTCACTTCTCAAACCCCAATCCAAATATTAGTAGGAGGGCTTATTGTTTATCTTCCAAGATTGAAGAAGCTATTCAATTAAATGATGAATCTGATTATGATTATGATTATGATTATGATGAAAGAAGCAGCTCCACCCAGGTGAAGAAGGAGATAGAAATGTGCTATGAGCTAATACACAGGCTTGGAAGGGGAGTTGTGTACCTGGGTTCTGCAAGGATGGGTCCGGGACACGATCATTACATCCAAACACAAGAATTGGCAAGGCAGGTAGCAAGCCTCTTGGGGTGCACTTCATGGTCAGGGGCTGGACCAGGGCTCATGGATGCAGCCACTCGAGGTGCTCTTCAAGCAGGAAAACCAGTTGGTGGATTCAAGATTGGTAAGGAAGCTAACGAATGGACATCCACCAATTTCCATCCATATCTTCCTTCTCACACTTACCTTACATGCAGGTTTTTTTCAGCAAGAAAGCACGGTTTAGTTGATGCTGTGGTTAGAACTAGTAACGGGGACAAAACGGCTATCATAGTTTTGCCAGGTGGAATTGGGACTCTAGATGAGGCTTTTGAGATTCTTGCATTGATCCAATTACAGAGAATAGGATCAGCATTACCGGTTCCGTTTGTGTTGATGAACTATGACTCTTTCTATTCAAAGCTTTTGGAGTTTCTGGATGTATGTGAAGATTGGGGAACTGTTTCCAAGGGAGAAGTTTCATCACTTTGGAAAGTATGCAATAACAACTCGGAAGCACTGGCCCACCTTGCAAAATTTTATGGTCTTGATCATGCTAACCAACAGTAA 990 42.63 MGWSSAATLSIGGGRGVDNLVAWNLLQSHHHHHHDYDYGQRVFNKSRCLTSHHYTPISHGVVHFSNPNPNISRRAYCLSSKIEEAIQLNDESDYDYDYDYDERSSSTQVKKEIEMCYELIHRLGRGVVYLGSARMGPGHDHYIQTQELARQVASLLGCTSWSGAGPGLMDAATRGALQAGKPVGGFKIGKEANEWTSTNFHPYLPSHTYLTCRFFSARKHGLVDAVVRTSNGDKTAIIVLPGGIGTLDEAFEILALIQLQRIGSALPVPFVLMNYDSFYSKLLEFLDVCEDWGTVSKGEVSSLWKVCNNNSEALAHLAKFYGLDHANQQ 329
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lomi1g00529 329 Gene3D - 105 328 - -
Lomi1g00529 329 SUPERFAMILY MCP-YpsA-like 96 317 - -
Lomi1g00529 329 PANTHER EXPRESSED PROTEIN 104 318 - -
Lomi1g00529 329 Pfam Possible lysine decarboxylase 169 316 IPR031100 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lomi1g00529 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
324197 Lomi2g04098 Lomi1g00529
333280 Lomi1g00529 Lomi2g04098
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Lomi Lomi-Chr1:5048641 Lomi2g04098 Lomi-Chr2:46626511 wgd