Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lomi1g00529 | ATGGGATGGTCGTCAGCTGCTACTTTATCAATTGGAGGAGGAAGAGGTGTTGATAATTTGGTGGCATGGAACTTGTTACAGTCGCATCATCATCATCATCATGATTATGATTACGGTCAACGAGTTTTCAACAAAAGTCGTTGTTTGACTTCACACCACTACACTCCGATTAGTCATGGTGTTGTTCACTTCTCAAACCCCAATCCAAATATTAGTAGGAGGGCTTATTGTTTATCTTCCAAGATTGAAGAAGCTATTCAATTAAATGATGAATCTGATTATGATTATGATTATGATTATGATGAAAGAAGCAGCTCCACCCAGGTGAAGAAGGAGATAGAAATGTGCTATGAGCTAATACACAGGCTTGGAAGGGGAGTTGTGTACCTGGGTTCTGCAAGGATGGGTCCGGGACACGATCATTACATCCAAACACAAGAATTGGCAAGGCAGGTAGCAAGCCTCTTGGGGTGCACTTCATGGTCAGGGGCTGGACCAGGGCTCATGGATGCAGCCACTCGAGGTGCTCTTCAAGCAGGAAAACCAGTTGGTGGATTCAAGATTGGTAAGGAAGCTAACGAATGGACATCCACCAATTTCCATCCATATCTTCCTTCTCACACTTACCTTACATGCAGGTTTTTTTCAGCAAGAAAGCACGGTTTAGTTGATGCTGTGGTTAGAACTAGTAACGGGGACAAAACGGCTATCATAGTTTTGCCAGGTGGAATTGGGACTCTAGATGAGGCTTTTGAGATTCTTGCATTGATCCAATTACAGAGAATAGGATCAGCATTACCGGTTCCGTTTGTGTTGATGAACTATGACTCTTTCTATTCAAAGCTTTTGGAGTTTCTGGATGTATGTGAAGATTGGGGAACTGTTTCCAAGGGAGAAGTTTCATCACTTTGGAAAGTATGCAATAACAACTCGGAAGCACTGGCCCACCTTGCAAAATTTTATGGTCTTGATCATGCTAACCAACAGTAA | 990 | 42.63 | MGWSSAATLSIGGGRGVDNLVAWNLLQSHHHHHHDYDYGQRVFNKSRCLTSHHYTPISHGVVHFSNPNPNISRRAYCLSSKIEEAIQLNDESDYDYDYDYDERSSSTQVKKEIEMCYELIHRLGRGVVYLGSARMGPGHDHYIQTQELARQVASLLGCTSWSGAGPGLMDAATRGALQAGKPVGGFKIGKEANEWTSTNFHPYLPSHTYLTCRFFSARKHGLVDAVVRTSNGDKTAIIVLPGGIGTLDEAFEILALIQLQRIGSALPVPFVLMNYDSFYSKLLEFLDVCEDWGTVSKGEVSSLWKVCNNNSEALAHLAKFYGLDHANQQ | 329 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lomi1g00529 | 329 | Gene3D | - | 105 | 328 | - | - | |
| Lomi1g00529 | 329 | SUPERFAMILY | MCP-YpsA-like | 96 | 317 | - | - | |
| Lomi1g00529 | 329 | PANTHER | EXPRESSED PROTEIN | 104 | 318 | - | - | |
| Lomi1g00529 | 329 | Pfam | Possible lysine decarboxylase | 169 | 316 | IPR031100 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lomi1g00529 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 324197 | Lomi2g04098 | Lomi1g00529 | |
| 333280 | Lomi1g00529 | Lomi2g04098 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Lomi | Lomi-Chr1:5048641 | Lomi2g04098 | Lomi-Chr2:46626511 | wgd |