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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lomi2g04111	ATGGCTGCTGCTCAGGCTGTGGAGGGTGCAGCGGTGAAAGCTCTCCGATCTGTTTTCCACCGTGTCCGGCAGGCGGCTGAGAGATCTGGACGTCACGCCGATGATGTGCGAGTGATTGCAGTTAGCAAGACAAAACCTGTATCTCTCATCCGCCAAGTTTACGACGCCGGACACCGATGTTTTGGGGAAAACTATGTCCAAGAATTCATTGAAAAAGCTCCTCAGCTTCCGGAGGACATTCAGTGGCACTTTATTGGGCATTTACAGAGCAATAAAGCAAAATCCTTACTTGCTGCTGTTCCAAATCTGTCAATGGTACAAGGTGTAGATAATAAGAAGATTGCAAATCATCTTGATCGTGCAGTTTCAAGCATTGGTCGAACGCCTTTGCCTGTTATGGTCCAAGTAAATACCAGTGGAGAGATATCAAAATCTGGGATTGAACCATCAAGTTGTGTAGAGCTAGTGAAGCATGTTAAGTTTAACTGCCCAAACCTCGTGTTTTCTGGCTTAATGACTATTGGAATGCCAGATTACACATCCACTCCAGAGAACTTCAGGACTCTATTCAGATGCAGAGCTGAGATCTGCAAGGAACTTGGGATGCCTGAAAACCAGTGTGAACTATCAATGGGCATGTCTGGCGACTTTGAATTAGCGATTGAAATGGGCAGCACAAATGTAAGAGTTGGATCAACCGTTTTTGGACCAAGGGATTATCCAAAGAAACAGCAGCAGCAGTAA	744	45.56	MAAAQAVEGAAVKALRSVFHRVRQAAERSGRHADDVRVIAVSKTKPVSLIRQVYDAGHRCFGENYVQEFIEKAPQLPEDIQWHFIGHLQSNKAKSLLAAVPNLSMVQGVDNKKIANHLDRAVSSIGRTPLPVMVQVNTSGEISKSGIEPSSCVELVKHVKFNCPNLVFSGLMTIGMPDYTSTPENFRTLFRCRAEICKELGMPENQCELSMGMSGDFELAIEMGSTNVRVGSTVFGPRDYPKKQQQQ	247

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lomi2g04111	247	PANTHER	PROLINE SYNTHETASE CO-TRANSCRIBED BACTERIAL HOMOLOG PROTEIN	4	244	IPR011078	GO:0005622(PANTHER)\|GO:0030170(PANTHER)\|GO:0030170(InterPro)
	Lomi2g04111	247	CDD	PLPDE-III-YBL036c-euk	15	236	-	-
	Lomi2g04111	247	Gene3D	Alanine racemase	2	247	IPR029066	-
	Lomi2g04111	247	Pfam	Alanine racemase, N-terminal domain	17	238	IPR001608	-
	Lomi2g04111	247	NCBIfam	YggS family pyridoxal phosphate-dependent enzyme	18	238	IPR011078	GO:0030170(InterPro)
	Lomi2g04111	247	Hamap	Pyridoxal phosphate homeostasis protein.	13	237	IPR011078	GO:0030170(InterPro)
	Lomi2g04111	247	PIRSF	YBL036c-PLPDEIII	1	244	IPR011078	GO:0030170(InterPro)
	Lomi2g04111	247	SUPERFAMILY	PLP-binding barrel	12	236	IPR029066	-
	Lomi2g04111	247	ProSitePatterns	Uncharacterized protein family UPF0001 signature.	82	96	IPR011078	GO:0030170(InterPro)
	Lomi2g04111	247	FunFam	Pyridoxal phosphate homeostasis protein	3	245	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lomi2g04111	K06997	PLP dependent protein

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Lomi	Lomi-Chr13:10313852	Lomi2g04111	Lomi-Chr2:46743653	dispersed
	Lomi	Lomi-Chr2:46743653	Lomi14g00396	Lomi-Chr14:8292842	transposed