Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lomi2g04127 | ATGGCGATTTTCGCGGTAAAATTGAATTATGGATCTGCATTGAAGCTTCAGTCTCGAGTGTTCATGAATCTGTGGGCAACGAAGGTTATAATAGTTCGTTGTTGTTCCAATTTGGGGGAAAGGTCTACGAATTTTCCAGTTAGGTACACTCCTAAGAAATCTTCAAAATATAATAAACCTAACGATTTTGCTCCAAAGGAATCCGAGAATTATGAAATGCGTCGTAGTCGATTCAGAAACCCTAATTTGACGAATGTTACTTTAGACACATCAAAGGATATTGATTTTAATACAGGGAATTTAAGATCAGAAGAGAACAAATTTTGTAATTCAGATACGAGATTAAAGCCTATGAAAGAACTTCATGAGTTTGATGACATGGATGCTTATGAGGAGGGTATAGATGATGAACTTGACTTTGATAATGGAAATTACGAAGTTAAAAGTCTGGAATTTGAGCGTAGTAAAACTAAAGAAGAAGCTGAGAAGACAGCGATTGGATTGCTTGCTGCAAGAGCATATACAGCACTCGAGCTGAAGAAGAAACTGCTAGGAAAGAAGTTCCCTCTTCAAGTTGCCAATGCTGTGATTTCTGACTTCCAGAACAGAGGGTTGATTAATGATTTCTTGTATGCTGAAGCATTTTCTCGGTCAAGATGGTCTTCATCAAGTTGGGGTCCACGTAGAATCAAGCAAGCCCTGACTAAAAAAGGTGTCAATGATTTCGATGCACAGAAAGCTATAAAGTTGGTTTTAGAGGATGGTGAACCCGGTGATGATCAGGTTTCACGACTTGGATTGTCAAAGCCCTCGATGGACCATCTATTTGCCCAAGCTTCAAAGCAATGGCTCCGTGCTAAAGATCTTCCCAGTGAAAAGCAAAAGTCAAGGATCATCACGTGGCTTCAATACCGTGGCTTTAACTGGGGCATTATCAGCTTCATCTTGAAAAAGTTACAAGCGGAGCATCCTCCATAG | 978 | 39.78 | MAIFAVKLNYGSALKLQSRVFMNLWATKVIIVRCCSNLGERSTNFPVRYTPKKSSKYNKPNDFAPKESENYEMRRSRFRNPNLTNVTLDTSKDIDFNTGNLRSEENKFCNSDTRLKPMKELHEFDDMDAYEEGIDDELDFDNGNYEVKSLEFERSKTKEEAEKTAIGLLAARAYTALELKKKLLGKKFPLQVANAVISDFQNRGLINDFLYAEAFSRSRWSSSSWGPRRIKQALTKKGVNDFDAQKAIKLVLEDGEPGDDQVSRLGLSKPSMDHLFAQASKQWLRAKDLPSEKQKSRIITWLQYRGFNWGIISFILKKLQAEHPP | 325 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lomi2g04127 | 325 | Pfam | RecX, third three-helix domain | 273 | 315 | IPR053925 | - | |
| Lomi2g04127 | 325 | PANTHER | REGULATORY PROTEIN RECX FAMILY PROTEIN | 14 | 324 | IPR003783 | GO:0006282(InterPro) | |
| Lomi2g04127 | 325 | Hamap | Regulatory protein RecX [recX]. | 133 | 323 | IPR003783 | GO:0006282(InterPro) | |
| Lomi2g04127 | 325 | Pfam | RecX, second three-helix domain | 207 | 247 | IPR053924 | - | |
| Lomi2g04127 | 325 | Gene3D | - | 270 | 324 | IPR036388 | - | |
| Lomi2g04127 | 325 | Gene3D | - | 207 | 250 | IPR036388 | - | |
| Lomi2g04127 | 325 | Gene3D | - | 160 | 205 | IPR036388 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lomi2g04127 | K03565 | regulatory protein |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 324179 | Lomi2g04127 | Lomi1g00501 | |
| 333298 | Lomi1g00501 | Lomi2g04127 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Lomi | Lomi-Chr1:4740689 | Lomi2g04127 | Lomi-Chr2:46921523 | wgd |