Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lomi2g04134 | ATGAGCTGGTGGCGATCAGGATTCGTCGGTGCTGCAAGGAAAAAACTCGAAGACAGCAACCCATCACGCAAGTACCAAAGGTTCGCTTTAGTCATTGGCGTCACAGGCATTGTTGGAAATAGCCTTGCAGAAATCCTACCGCTTCATGACACCCCTGGTGGGCCCTGGAAGGTGTATGGAGTGGTCCGCCACCCTCGACCACCATGGCACGCAGATTATCCATTGGAATATATCCAGTGTGACATCACAAATCCAGAAGAAACACAATCAAAACTCTCAAATTTACCAGATCTCACCCATGTATTTTACGTAACATGCGCTAACTGCTCAACTGAAGAAGAAAATTGTGAAGTCAATGGGCAAATGTTCAGAAATGTTCTAAATGCAGTAATACCTAATGCCCCGAATTTACAACACATATGCTTACAAACGGGTCGTAAGCATTATCTCGGACCATTTGAACAATGGGGGAAGGTTGATACAACTCATGATGGTCCTTTTTATGAAGATCTTCCTAGGCTTAATACCCAAAATTTCTACTACACACTAGAAGATATGTTGTTTAAAGAGGTAAAACAAAAGGAAGGATTAACATGGTCGGTTCATAGACCGGGTTTGATTTTTGGGTTATCACCGTATAGTATGATGAACATATTAGGAAGTTTATGTGTTTATGCTGAAATCTGTAAATATGAAGGTGAACCATTGAAGTTTCCAGGAACAAAAGAGGCGTGGAATAGCTATCATGACGCTTCTGATGCTGACCTGATTGCTGAGCATCATATATGGGCGGCTGTGGACCAGTACGCAAAAAATGAAGCGTTTAATGTCAGTAATGGTGATGTATTCAAATGGAAGCATTTTTGGAAAGTGTTGGCTGAGCAATTTGATGTGGAAAACGGCGGGCTACAAGAAGATGAAGATAGGAAGAGTTTGAATGAGATGATGAAAGATAAAGGACCAGTTTGGGATGCAATCGTGACAGAAAAGGGCCTTTTACCGACTAAATTAGAGCAGGTTGGAGGATGGTGGTTTGTGGATGTTATTCTTAGCAAGGAGGGTATGCTGGATATCATGAACAAGAGCAAGGAACATGGTTTTTTAGGGTTTCGGAACACAAAATCATCTTTAGTTTCTTGGATTGATAAGATAAAATGTTGCAAGCTTGTTCCCTAG | 1176 | 41.5 | MSWWRSGFVGAARKKLEDSNPSRKYQRFALVIGVTGIVGNSLAEILPLHDTPGGPWKVYGVVRHPRPPWHADYPLEYIQCDITNPEETQSKLSNLPDLTHVFYVTCANCSTEEENCEVNGQMFRNVLNAVIPNAPNLQHICLQTGRKHYLGPFEQWGKVDTTHDGPFYEDLPRLNTQNFYYTLEDMLFKEVKQKEGLTWSVHRPGLIFGLSPYSMMNILGSLCVYAEICKYEGEPLKFPGTKEAWNSYHDASDADLIAEHHIWAAVDQYAKNEAFNVSNGDVFKWKHFWKVLAEQFDVENGGLQEDEDRKSLNEMMKDKGPVWDAIVTEKGLLPTKLEQVGGWWFVDVILSKEGMLDIMNKSKEHGFLGFRNTKSSLVSWIDKIKCCKLVP | 391 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lomi2g04134 | 391 | Gene3D | - | 27 | 391 | - | - | |
| Lomi2g04134 | 391 | CDD | 5beta-POR-like-SDR-a | 29 | 331 | - | - | |
| Lomi2g04134 | 391 | FunFam | Iridoid synthase | 25 | 391 | - | - | |
| Lomi2g04134 | 391 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 29 | 301 | IPR036291 | - | |
| Lomi2g04134 | 391 | Pfam | PRISE-like Rossmann-fold domain | 87 | 391 | - | - | |
| Lomi2g04134 | 391 | PANTHER | 3-OXO-DELTA(4,5)-STEROID 5-BETA-REDUCTASE | 23 | 391 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lomi2g04134 | K22419 | Delta4-3-oxosteroid 5beta-reductase [EC:1.3.1.3] |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 122825 | Lomi2g04134 | Lomi3g00932 | |
| 122826 | Lomi2g04134 | Lomi4g02446 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Lomi | Lomi-Chr2:46987396 | Lomi3g00932 | Lomi-Chr3:7611625 | dispersed | |
| Lomi | Lomi-Chr2:46987396 | Lomi4g02446 | Lomi-Chr4:32282608 | transposed |