Gene detail

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Gene ID

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Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lomi2g04143	ATGTATCAGGAAAGAGCGCCACCATCAGCTACCGCAAACCTCACCATCAAAATATCAAACTCAGCCCAAAAGCCCAGAAAAGAGATACTAACCAACATTGTTCCTGCAACATCAATTTCATCATCTCCATATAACTCTCCATCTCTAATCTCACCACCATCTTCTGCCTTTGTTTCAGCTCTCCAGTCCCCTTACATATCTCCCAGAGCCATTAAAGATGACCCAAATCACCCTCAAGAAACCGAAACCGCCACTGCGACCACCACCGGTGCCACCACACCCACTACATTCACTCACCCATCAACTCCAGTATCCTATTGTGGGTCCGGGAGTGACGATATTCCGAGCACTTCCTACACTCCTCCATCAGAAAGATACGATTTTTCGGATGACACAAAGCTCAAAATAGTCAACTGTGTTCCTGTACCTTCTTCGGATACTAGTACCAACACTAATAGTAATACTAATAATGCAACTGCACCTCGTATTTCATTCTCATTTCCTGTTCCTCGGGTCTCATTCCAAAAAGGGTCTGTGTCGCCTGCAAATGCAAAGCTAAGAAACTGTGATGTTTACATAGGATACCACGGTCAAAACCGGAACTTGGTTCGGTTTTGTAAATGGCTGAAATCGGAGCTAGAGCTTCAAGGGATTGCTTGTTTTGTAGCGGACCGAGCGAAATATGCAGATTCGCAAAGCCACGAAATTGCTGATAGAGTCATTTGTTCGGTCACATTTGGGGTTGTGGTGGTCACTAAAGATAGTCTTTCGAGTTATTTAAGTCTAGAAGAGATTAGATTTTTTGCTCAAAAGAAGAATCTGATTCCGTTGTTCTTTGACACCGATTCAAATGAAATTACTAATCTCCTTGCTCAGAGTTCCGACAGTAAAGAATGTAAAGAAGCAATTGACGGGTTAATGAAGTCACACGAGTTTAAACTCGAGGCAAACGAGGGGAATTGGCGATTTTGTGTGTCAAGAACAGCCGGGATGTTAAGAGGAAGGCTTGGGAGGATGAGTGTAGCTGAAAAGGAGATTGAAAACATCAATGAAATCCCATTTCCCAAAAACAAATTTTTCGTGGGTCGAGAAAAGGAGCTTGCAGATATTGAAACAGCGTTTTTTGGGTGCGGGGAGTTTGAAAACGACCGTAATGTTGTAAATGCCGCGAAAAGTGGAACGATGGGAACATCAGAAGGTCTTGCAGATGAAGAAAGTGAAGTTGATGGAAGTCAAAGTGGGAAATTCATAAACTTTGAAGTTGGTAAGTGTAAAGAACCGAATTTGGAAGCTTGGGTCGAACCAGTTATAGGGAGAAATTCATTGAAAGGGCCTAAATATAAGAAAACAAAGAGTGGGAAATACAAGAATTTTGGAAGTAGTATTGTGTTCATCAATGGAAGTCCAGGAATGGGGAAAACAGAGGTGGCATTAGAGTTTGCTCACAGATATTCTCAAAGATACAAAATGGTGTTATGGGTTGGCGGGGAAGCCCGATATTTCAGACAAAATATACTGAATTTGTCTTTGAATTTAGGGTTAGATGTAAGTGCAGATGAAGAGAAAGAAAGGGGAAGGATTAGGAGCTTTGATGAGCAAGAAACTGAAGCTTTCAAGAGGGTAAAATGGGAACTATTTCGCGATATGCCCTATTTACTGATCATTGATAATCTTGAAACAGAAAAGGATTGGTGGGAAGGGAGAGATTTACATGATTTGATACCAAGAAACACTGGTGGTTCACATGTTATCATCACAACTAGGCTCCCAAGAGTAATGAGCTTTGATCCAATGCAACTTCAACCATTGCCATTAAAAGATGCAATCTTGTTGATGAAAGGAAGACGAAAGAAAGAGTACCCGGGTCAAGAAATTGAAATTCTTGGAAAATTTGATGAGAAATTGGGAAGGTCGAGTTTTGGGTTATCAGTGATTGGGTCGTTGCTCTCTGAACTTGCAATCACTCCTTCCACCCTCTTTGAAGCCATAAATCATATTCGTTTGGACGAACCTTCATCTCATTTTGATGAAGTATTTTGGGGAAACAATAAGTTTTTACTCAAAGTCTTGATCTTTTGCATTACTATTTTGAATGAAGCTAACGGGACTCGTAACGATCTCGCCTCAAAGATGCTTCTAGTTGGGGCTTGGTTTGCTCCATTACCCGTCTCAGCAAATTTACTAGCTGCCGCTGCAACCGACATAAGCGGTTCCAATAGGTTCAAGAAATGGGCGAAGTGTGCAAACATGACTTTATTTTGTTGTTCCGGGTTTCTCGAGAGTCAAACTTCAAAAAGTGAAGATGATTCAGCTCTTGTGTTAGTCAAATTGGGGCTTGCTAGAAGAGTGAATAGGCATCCAGGATACTACATTCTGTTTCACCCGATAACTCAAATGTTCGCAAAACTAAAAGGGGGTTTACTCACAGCTATAGCAACGATTCAAGGCATAAGAAAAATAGGTAACCCAGTTTTGAACTCGGACCACCTCTGGGGTTCTGCTTTTCTTGTATTCGGGTTCAAATCCGAGCCACCATTAGTCCAACTTAAAGCCAACGACATGGTTCTCTTCATAAAGAAAACCGCTCTGCCTTTGGCAATAAGAGCGTTTACTACATTTTCAAGATGCAATTCATCTTTGGAGCTGCTAAAAGTCTGCACAAATGTTCTTGAAGAAGTGGAGAAATCATTTGTTTCACAAATTCAAGACTGGTGTCACGGTTCACTTTGCTGGAAGAAGAAAATGAACTCACATCAGAGAATTGATGAATACGTATGGCAAGACGTGACACTTTTAAAGGCTACTTTATTAGAGACACGAGCAAAATTGCTGTTGAGAGGTGGGCATTTTGACAACGGTGAAGAGCTATGCAGGACATGTATCAGTATCAGAACAGTTATGCTTGGCCATAATCATGCTCAAACTTTGGCTGCTCAAGAAACATTAGCAAAATTAGTTAGAATGAGGAGTAAGATATGA	2979	41.15	MYQERAPPSATANLTIKISNSAQKPRKEILTNIVPATSISSSPYNSPSLISPPSSAFVSALQSPYISPRAIKDDPNHPQETETATATTTGATTPTTFTHPSTPVSYCGSGSDDIPSTSYTPPSERYDFSDDTKLKIVNCVPVPSSDTSTNTNSNTNNATAPRISFSFPVPRVSFQKGSVSPANAKLRNCDVYIGYHGQNRNLVRFCKWLKSELELQGIACFVADRAKYADSQSHEIADRVICSVTFGVVVVTKDSLSSYLSLEEIRFFAQKKNLIPLFFDTDSNEITNLLAQSSDSKECKEAIDGLMKSHEFKLEANEGNWRFCVSRTAGMLRGRLGRMSVAEKEIENINEIPFPKNKFFVGREKELADIETAFFGCGEFENDRNVVNAAKSGTMGTSEGLADEESEVDGSQSGKFINFEVGKCKEPNLEAWVEPVIGRNSLKGPKYKKTKSGKYKNFGSSIVFINGSPGMGKTEVALEFAHRYSQRYKMVLWVGGEARYFRQNILNLSLNLGLDVSADEEKERGRIRSFDEQETEAFKRVKWELFRDMPYLLIIDNLETEKDWWEGRDLHDLIPRNTGGSHVIITTRLPRVMSFDPMQLQPLPLKDAILLMKGRRKKEYPGQEIEILGKFDEKLGRSSFGLSVIGSLLSELAITPSTLFEAINHIRLDEPSSHFDEVFWGNNKFLLKVLIFCITILNEANGTRNDLASKMLLVGAWFAPLPVSANLLAAAATDISGSNRFKKWAKCANMTLFCCSGFLESQTSKSEDDSALVLVKLGLARRVNRHPGYYILFHPITQMFAKLKGGLLTAIATIQGIRKIGNPVLNSDHLWGSAFLVFGFKSEPPLVQLKANDMVLFIKKTALPLAIRAFTTFSRCNSSLELLKVCTNVLEEVEKSFVSQIQDWCHGSLCWKKKMNSHQRIDEYVWQDVTLLKATLLETRAKLLLRGGHFDNGEELCRTCISIRTVMLGHNHAQTLAAQETLAKLVRMRSKI	992

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lomi2g04143	992	Gene3D	-	150	308	IPR035897	-
	Lomi2g04143	992	ProSiteProfiles	TIR domain profile.	187	303	IPR000157	GO:0007165(InterPro)
	Lomi2g04143	992	PANTHER	DNA REPAIR PROTEIN RADA	182	985	-	GO:0000725(PANTHER)
	Lomi2g04143	992	SUPERFAMILY	Toll-Interleukin receptor TIR domain	188	288	IPR035897	-
	Lomi2g04143	992	SMART	AAA-5	459	624	IPR003593	GO:0016887(InterPro)
	Lomi2g04143	992	MobiDBLite	consensus disorder prediction	68	122	-	-
	Lomi2g04143	992	Gene3D	-	429	596	IPR027417	-
	Lomi2g04143	992	MobiDBLite	consensus disorder prediction	80	122	-	-
	Lomi2g04143	992	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	354	668	IPR027417	-
	Lomi2g04143	992	Pfam	NB-ARC domain	459	608	IPR002182	GO:0043531(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lomi2g04143	-	-

Event-related genes

Select	Gene_1	Gene_2	Event_name
	122833	Lomi2g04143	Lomi5g01890

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Lomi	Lomi-Chr1:46336975	Lomi2g04143	Lomi-Chr2:47042679	dispersed
	Lomi	Lomi-Chr2:8952870	Lomi2g04143	Lomi-Chr2:47042679	dispersed
	Lomi	Lomi-Chr2:47042679	Lomi5g01890	Lomi-Chr5:30257813	wgd