Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lomi2g04144	ATGATATCCATTGATGATCCTCCACCATCAGATCCTTCATCATCTCATCATCAACAACAACAAGTTTCTCATGATCTAAAGTCTTCTGATATAGATCTGAAGTTTACAGATGCTGATCTTGATGACAACAACAACCAACTACCAAAGTTCTCTATAAGGAATTATGTTTTTGGTTTAAGGAGCAAAGATATTGTCTCTAATTGGCCTTTTTCTACAACAAGTTTACAACTTTGCCTAAAACATGGAGTCAAAAATTTATTGCCACCTTTCCAGTCTCTTGATTCATTGAGAAATAAGTCATCTTTGCCCAGATGCCGTCTTGAAAATCATTTGACCGATGAAGAACTCATAAACAGTTTTGATGGGAAGCCCACAAACGAATTCAAATCAATGGAAAAACTAGACTTGGAGTCTGTAACTACAAATTCAAGTGGTTCAAAAGGTCAGAGGTCAAAGTTTCAGAAACTGCCATCTTCTCAAAAACCAGTAAATGATTCTCTTCACATTAGAAAGAGTAGATTCGTAATGAAGTTGAATTCGGGTATTGAACAAGTTGAGGAAATTGTTCCAACTAGTTTCATCCTCTCTGAAACAATGGCATCTAAAGTTTGTCCAGTTTGCAAGATCTTCTCATCATCTTCAAACACGACTCTGAACGCTCACATTGACCAATGTCTAACCGGGGAAGGGACTATAAAGTGGACCAGTAGTTCCAAGGTTATAGTCAAACATAAAGTCAAACCTCGAAAGATGAGGTTAATGGTGGATGTATACAAAACAGCTCCACATTGTACTATTGAAGAACTCGATAGAAGAAATGGTACAAGTTGGGCTACTAATTCGAGTTTTCCCGCTCAAGAATTTCAGTTTCAAGGTGAAGAAGATAAAGAAGATCCAAAAATGTTTCGAGATGAAGAAGAAGATAATGAAGATCCAATAACGACTATAGTTAACTCCGAGGTTGCTGATGACGAAGGCGAGGTGTATATCGACACCAATGGCACAAAAGTTCGGATCTTGTCAGTACCAAAAGCAGGTTCATCAGATAATCAAAAAGCTCAGAAGTTAGTAAAAGGAGTCATAGGGTGTAAACTCATCATCGGTAAGAAGAAAAATAATAGTATTTATAAGCAGAAACATCATCAGAAGATTTTGAAACTCAGCCCTAATTCCAAAATATTATGCTCACCAAAGCCTCAGGCAAGAAGTGGTCATGAAGAAGATGTTGTCATGGTTGAAAATTGCAGTAAAGATGATTATGGGAAAGAATCAATGAAGGTGGCCGATTTGGGTATAGTAAGGCCACCATGGGCATGCTCTAAGCGAACTGGTCTTTTGAAAAAGTTCAGTGGCAAGAATCAAAAGATGGAATTGCAACGTCAGGAAAGGAAAGATTTGTTTGTTGAAAGTGATAAATCTTTTTTCAAACGTGATTTAGGAATTCCTGGAAACTTAACTAACAAGGCGGCTTCTTCTCAAAATAAGAAGAAAATGAGAACTTCATTGTCATTAATCAAGCAGCCTCTTAAGAGTAATAAGATGGACTTTAAAAAGGAAGGCAAGCGTATGCATGATGAGGATGATGATGAGAAGGATGATGATGGTGGTGATGATTGTCGTTATCCAGATGCATGTCCATCACAACATTCTGATAGTCTTGATACTAGATCAAAGGGGAAAAAGTTTTCATCTTTGACCGATAATCGGTTATTCCCACCTTCCAAATTCAACTTGAAACGAAAATTTTCAGCTGTTAGGAAATCTTGGGACAAATCTGTTGATGAGTCTTCTCAAGACTCTTTCAAAGAACAATTTAGAATGGAAGAACAATCAGTTTCTAAGAAGAATGAAGATTTAAGATCTGTTACTTCAAAAGGTTCAGATGGAGATTCTTCTGCGGGGATTCAAGCTGTTAATGTCGACGAATTATGTGATGTAGAATCTGTTGGAGACGAGGCGTTATCATCCATCCCAGCTCCTAGTTTTATGGGTTTGAGCAACTCTTTCAATCCAGAATTTTCAAAAAAGGAGTGCATCGATCAGCTGTATCAAGATCAGATATGTTCAACTAACCGTGCTCCAAATGATGTTGAAAAATATGAAAATTACTTTCAAATGGTCGATCCTATTCCTATTCCTGGACCTCCCGGATCATTCTTGCCTGCCAGTCCTGGTGGAGATTCGGTCTCTGAAGAACAAATTCAAGAAACTAGGATTCTGTCAAGTGAAAACCAGCATCTTCATGATACAACGGAAAATCAAGATTCCATGTCTAATTCTCCAGTTTCAACGGTCTCTAATTCAAGATCTACTTCTGTACAAGATGATACATATAAAAAATCGTCTTTTGGTATGGGGTTTGCTGATAATGGTTCATCACATAATAGTTTCAAGAATGATCAGCCTTGCTGTTGCTCGAGAAAGGAAGTTGCTTTAAACTACCAAGAATCGTTTAATGTAAAGAAACAACAGATTGAATCAAACAGGAGTTTTCCAAGCAGTTTTGACTTCAAATCTGAGATGTTTCCAGTAAGCAACTACGCAACCTCACCACCGCCTGAACCTGCGAATTTTCCTACCAACAAAAGATTCCCGGTTTCTAGTGATTGTGATGCTGCTGTTGGTCCTTCAAAACCTGTTCTTAGGTTAATGGGAAAAAACTTAACCATAGTTAAGACGGATGACGATGAATTTAGACCTCCACAGTCAAGTCAACCACCTCCCCAACGGCCTGTAGTGTTTAGTCAGTTCCAAAATGGGATTGACTCTCAACATCATCATGTCCATCCATGGAGTAATACAAGAAGCAATGTAGACTTGAGGCCAAATTATGGTGGTTTCATGACACCTATGGATCGTTATGGTCATGATAGTTTATATTTGGGGCCTAGTGGGCCCCATGCAAGGTCCCAACATGGTCATAACTTTCTCAATTTTCAAGCAGTAAGTGGAAGAAATGGTTATAGTGATTTCCCTAGAAATGAAGGTGATGATTCTATGCGAAACGAATTCTTGAAAAGAGGTCAGGGGCAAACGAATCAGTTATACACAATGTACCCTCCATATCTTGGTGGTGGTGGGTTTCAAACTTCTTTGGGTAATGGTGATTTTGGCAAGTTGAATATAGGGTCATTATCCTCTTCATCGTCATCGCCTTCAACGTCTCATTTGCAACCTTCAAGAGCGCATTACCCTCGTGGCTATCCTTGA	3210	38.5	MISIDDPPPSDPSSSHHQQQQVSHDLKSSDIDLKFTDADLDDNNNQLPKFSIRNYVFGLRSKDIVSNWPFSTTSLQLCLKHGVKNLLPPFQSLDSLRNKSSLPRCRLENHLTDEELINSFDGKPTNEFKSMEKLDLESVTTNSSGSKGQRSKFQKLPSSQKPVNDSLHIRKSRFVMKLNSGIEQVEEIVPTSFILSETMASKVCPVCKIFSSSSNTTLNAHIDQCLTGEGTIKWTSSSKVIVKHKVKPRKMRLMVDVYKTAPHCTIEELDRRNGTSWATNSSFPAQEFQFQGEEDKEDPKMFRDEEEDNEDPITTIVNSEVADDEGEVYIDTNGTKVRILSVPKAGSSDNQKAQKLVKGVIGCKLIIGKKKNNSIYKQKHHQKILKLSPNSKILCSPKPQARSGHEEDVVMVENCSKDDYGKESMKVADLGIVRPPWACSKRTGLLKKFSGKNQKMELQRQERKDLFVESDKSFFKRDLGIPGNLTNKAASSQNKKKMRTSLSLIKQPLKSNKMDFKKEGKRMHDEDDDEKDDDGGDDCRYPDACPSQHSDSLDTRSKGKKFSSLTDNRLFPPSKFNLKRKFSAVRKSWDKSVDESSQDSFKEQFRMEEQSVSKKNEDLRSVTSKGSDGDSSAGIQAVNVDELCDVESVGDEALSSIPAPSFMGLSNSFNPEFSKKECIDQLYQDQICSTNRAPNDVEKYENYFQMVDPIPIPGPPGSFLPASPGGDSVSEEQIQETRILSSENQHLHDTTENQDSMSNSPVSTVSNSRSTSVQDDTYKKSSFGMGFADNGSSHNSFKNDQPCCCSRKEVALNYQESFNVKKQQIESNRSFPSSFDFKSEMFPVSNYATSPPPEPANFPTNKRFPVSSDCDAAVGPSKPVLRLMGKNLTIVKTDDDEFRPPQSSQPPPQRPVVFSQFQNGIDSQHHHVHPWSNTRSNVDLRPNYGGFMTPMDRYGHDSLYLGPSGPHARSQHGHNFLNFQAVSGRNGYSDFPRNEGDDSMRNEFLKRGQGQTNQLYTMYPPYLGGGGFQTSLGNGDFGKLNIGSLSSSSSSPSTSHLQPSRAHYPRGYP	1069

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lomi2g04144	1069	MobiDBLite	consensus disorder prediction	511	528	-	-
	Lomi2g04144	1069	MobiDBLite	consensus disorder prediction	138	163	-	-
	Lomi2g04144	1069	MobiDBLite	consensus disorder prediction	596	633	-	-
	Lomi2g04144	1069	MobiDBLite	consensus disorder prediction	485	508	-	-
	Lomi2g04144	1069	Gene3D	Classic Zinc Finger	203	228	-	-
	Lomi2g04144	1069	MobiDBLite	consensus disorder prediction	751	775	-	-
	Lomi2g04144	1069	PANTHER	HAPLESS PROTEIN	1	936	-	-
	Lomi2g04144	1069	MobiDBLite	consensus disorder prediction	482	566	-	-
	Lomi2g04144	1069	MobiDBLite	consensus disorder prediction	1043	1069	-	-
	Lomi2g04144	1069	MobiDBLite	consensus disorder prediction	1	27	-	-
	Lomi2g04144	1069	MobiDBLite	consensus disorder prediction	8	26	-	-
	Lomi2g04144	1069	MobiDBLite	consensus disorder prediction	1043	1060	-	-
	Lomi2g04144	1069	MobiDBLite	consensus disorder prediction	712	775	-	-
	Lomi2g04144	1069	MobiDBLite	consensus disorder prediction	596	624	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lomi2g04144	-	-

Event-related genes

Select	Gene_1	Gene_2	Event_name
	118640	Lomi11g01815	Lomi2g04144
	122834	Lomi2g04144	Lomi5g01889
	122835	Lomi2g04144	Lomi6g00413
	122836	Lomi2g04144	Lomi7g00184

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Lomi	Lomi-Chr1:4263295	Lomi2g04144	Lomi-Chr2:47051695	wgd
	Lomi	Lomi-Chr11:26508166	Lomi2g04144	Lomi-Chr2:47051695	wgd
	Lomi	Lomi-Chr2:47051695	Lomi5g01889	Lomi-Chr5:30252696	wgd
	Lomi	Lomi-Chr2:47051695	Lomi6g00413	Lomi-Chr6:4525716	wgd
	Lomi	Lomi-Chr2:47051695	Lomi7g00184	Lomi-Chr7:1861405	wgd