AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lomi2g04145 ATGCAAAGGCATCGTAATCCTCCGAATGGATTTAGGTCTAATCCTATGGGAATCGGTGGTGGTGGCGGCGGTGTAGCTGCCGGTGGTTCCGGTTACCGGAATTTTAACCGCGGTGGTTTCGGTAGGGGGCAGCCACCTCCCCCGCGTAGGATTGATGTTTTTATGGAAGCTGGGAAATTAGCAGCTGAGTATTTAGTTGCAAAAGGTTTAATTCCGCCGAATTCGGGTAATGGTAAATGGCAAAATAGTAATTTGAAAACCCCGATCGATGGTGGGAGTGTTAGTAGTGGTAGTGCAACAGGTTCAAGAGATGGTATTAGGGTTAGCAGAACAATGGGATCTTTTAAAGACCCGAGGGTTGAAATGGTTATTTCACGGAGTTTATCAGATAAACAAGGAAATGGTGATTTAGTTTGTGGATCTACAGAAGAACAAAAATCAGGAAAAGATGGTGTTAGTGAGGAGCAAAAATCAGTATTGGGTGAACTAGAATCGAAAAGGTACGAGGCAGGAAAATTGGATGCAACAGCCCTGAACCAACAATGTCAATCGCCTGATGAAAATGAGGCAGTTAAGACCCCAGTTTCGGATGTCTCACATCAGGATTGTGTCGAGTCTGAGGAGAAAAGTGTTGATAAGAATGTAAATACGAGTACAGGTGACGTCGTGATGGAAGATGGCGACCGAGAGTCTGAAAAATCGGTTATTGTTAAAGAAGAGTCGTCAGAGGAAACTAATAATGATGCTGCAAATAACAACGGTAGTGATTTGTTGAATCTAATTAGGTTTAATAAAGTACCCACCAGAACTCGTTCTTCTATGACTCCTAAGGGGTCGAAAAGTGACCCAGTTTTAATTACAGGAGACGAAAACAGGAACGCAAACCCGAACTCTGGAGAACCCGTGAATTCGAATTCCTTGCAGGATGATGAAAAACAAATATTACATGCACGTGAACCAAAGATTCAAGAGGATCTTATGTATAAATTTGGACAAGGATTACATGCACGATCGCTATCTTTTCCTCAAAGATCCTCCATCTCTGAGCAAGAATTAAATGAGGAAAATCATGGGTTTACAAGAAGCAGCTCTGCTGTATTGGGCAGAGGTGAGAAACGACCGCTGCAAATTAACGATACCGTAGAATCAGCCAAGAAGTCTCGGGATTGGGCCTCTGCAAATCTTCAATCAAATGATTACTTGCATCTCTCTCAAGACGATGTACATGAGAATCATGGCACCAATCCGGTGACTGGATTTTCATCAATTGGACAATCGAAGCAAGAGCCAGTTTCGGTTGACTTTGATTTGACCATGAATAGTAGTTGTGATATAGCAGATAGACATATTAGACGCGGACCCGATGGCAAAGGGGTGGAGGTCATTGATTTGGATTGTGATTCCCTGCAAAATGACAATGATAATCCTGAGCGAAGGGACGAAGCTATATTCACAGATCTTGGGAGCTTTCCTGACAGTATGCAGAGGGTCAGTGACATGCCTCAGGATGGTTATGGGCTTATGATATCAGAGTTGCTAGATGCTGATATTCCTAATTCTAGTGTATCAACTGGTGTTAATTCTATGCATAATGAAATGAGCCTCCAAAATGAAGAGGGGATTCTTGATGACGATGAGTCGATATACATGTCGCTGGGAGAAATACCGATAAGTTTCGTGCCAGTCTGGGATCAGCAACCTTCACAGGGATACAATAAGCGCTATTAG 1728 42.94 MQRHRNPPNGFRSNPMGIGGGGGGVAAGGSGYRNFNRGGFGRGQPPPPRRIDVFMEAGKLAAEYLVAKGLIPPNSGNGKWQNSNLKTPIDGGSVSSGSATGSRDGIRVSRTMGSFKDPRVEMVISRSLSDKQGNGDLVCGSTEEQKSGKDGVSEEQKSVLGELESKRYEAGKLDATALNQQCQSPDENEAVKTPVSDVSHQDCVESEEKSVDKNVNTSTGDVVMEDGDRESEKSVIVKEESSEETNNDAANNNGSDLLNLIRFNKVPTRTRSSMTPKGSKSDPVLITGDENRNANPNSGEPVNSNSLQDDEKQILHAREPKIQEDLMYKFGQGLHARSLSFPQRSSISEQELNEENHGFTRSSSAVLGRGEKRPLQINDTVESAKKSRDWASANLQSNDYLHLSQDDVHENHGTNPVTGFSSIGQSKQEPVSVDFDLTMNSSCDIADRHIRRGPDGKGVEVIDLDCDSLQNDNDNPERRDEAIFTDLGSFPDSMQRVSDMPQDGYGLMISELLDADIPNSSVSTGVNSMHNEMSLQNEEGILDDDESIYMSLGEIPISFVPVWDQQPSQGYNKRY 575
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lomi2g04145 575 MobiDBLite consensus disorder prediction 75 107 - -
Lomi2g04145 575 MobiDBLite consensus disorder prediction 246 309 - -
Lomi2g04145 575 MobiDBLite consensus disorder prediction 72 159 - -
Lomi2g04145 575 MobiDBLite consensus disorder prediction 223 245 - -
Lomi2g04145 575 PANTHER PROTEIN, PUTATIVE-RELATED 407 574 IPR040276 -
Lomi2g04145 575 MobiDBLite consensus disorder prediction 179 309 - -
Lomi2g04145 575 MobiDBLite consensus disorder prediction 127 141 - -
Lomi2g04145 575 MobiDBLite consensus disorder prediction 1 51 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lomi2g04145 - -
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Lomi Lomi-Chr1:4288950 Lomi2g04145 Lomi-Chr2:47075342 wgd