AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lomi2g04168 ATGGCTGGCAATGACCTGCCAAATTTAGGCCGTGTGAAGCTCACAGACCTAATAGCTTCTGAAGGACTTCCTTCTGACACATACAAACTATCAGTTTCAACTTTGTCACAATCACTTGCTCAATATTCTGCTGCCATTATCCAATTGCCAGCAAGTGATGGGGCTCTCTTGAGGTGTTGCCTGGAATCTGCTCGACCGTACTTTAGTCAAAAACCCCCATATCCACCTGCCGATGTGATTCACATAAATGACTCACGTGAATGGTGCAAGACCTCTGGATACTCTGCAGATCCCCAACTATGGCAAGAAAGTTATGATTACAGACCAGGGCTAACTTCAATTGAACCGAACAATGACATGGAACTGCCACCTGTTGGGTTGGCTGATATATTTGTGCTACTTGGAAGTGCAGCCCGTGATATACTGGATTCAATCAGCTTTTATTTGAATCTACGTAGTTGTGCTTTCACTGAAATACTTGATAGTGTTCCTTTGAGAAATAGGGAAATTTCATCTTCGGTTTTGTCAGTTGGTTGTCACGCAAGGCCTTCTTTTCAGGGAGCTCAACACCACAACTTGACAACCCAAGAGGACGGGCAACTGGTTATGTTCTCAGACCATGAACATCAAGTTGACAAAAGCCTTATATCTCTTATGAAGTCAGATAAAGCAGGTCTTCACATCAGAGATTTTAATGGTCGTTGGGTGCTTGTGGATGATCTTGGTCCCCAAGAAGCGGTTGTGTACCCTGGACTTGCTCTGTACCATGCTACTGCTGGCTATGTCAGTCCTGCACTTCATAGAACTGATATGAGTAATTTACATGGTAACTTGTATGGGCGATGTTCTCTTACGTACAAACTCATGCCTAAATCCATGACCAGTCTTAATTGTTCAGAGATGAGAGCAGCTGGTCATGGTGTTGAAGCTCAGTTCCAGCTTCCAGTTTCAGTTGACGACTTTATGCAGAGACCACACTCCGTGGACCAACTCTTCAACAGAAACAGTTTCCCAAGTTTCAGTTTTCCTACAGTTCAAGAAGGATCTATGAAACCTTTAATGAAGAGGAAGAAAAACAGTTCGCGGTTAAAACCTTTGCCACCTTCCAAAAGGTTGCGTCTTGAAGCACAAAGAGTTCTTAAAGAGAGGGTTCAGGACATAGCTGATAAGAAAGGCATCAAGCTGAGATTCTGTACCCTAAAGGAGTGTGAGAGTCACATCCACACACTTGACAGCCCGTGTGGCAACATACGATTGGAGATTGGGTGGCCCCCAGGAGTGCCATTTGTTCATCCCCATGACCTACCCAACAAGGCAAAGATTGGATTTCTTGAAACATATGAACCTGGTTGGACAGCCAATCATGACATGGATATCAGTATGATTGATGCTGGACAATCTAGTCAGCATGTGGATAACTGA 1422 44.09 MAGNDLPNLGRVKLTDLIASEGLPSDTYKLSVSTLSQSLAQYSAAIIQLPASDGALLRCCLESARPYFSQKPPYPPADVIHINDSREWCKTSGYSADPQLWQESYDYRPGLTSIEPNNDMELPPVGLADIFVLLGSAARDILDSISFYLNLRSCAFTEILDSVPLRNREISSSVLSVGCHARPSFQGAQHHNLTTQEDGQLVMFSDHEHQVDKSLISLMKSDKAGLHIRDFNGRWVLVDDLGPQEAVVYPGLALYHATAGYVSPALHRTDMSNLHGNLYGRCSLTYKLMPKSMTSLNCSEMRAAGHGVEAQFQLPVSVDDFMQRPHSVDQLFNRNSFPSFSFPTVQEGSMKPLMKRKKNSSRLKPLPPSKRLRLEAQRVLKERVQDIADKKGIKLRFCTLKECESHIHTLDSPCGNIRLEIGWPPGVPFVHPHDLPNKAKIGFLETYEPGWTANHDMDISMIDAGQSSQHVDN 473
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lomi2g04168 473 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 62-RELATED 3 470 - -
Lomi2g04168 473 Gene3D - 25 328 IPR027443 -
Lomi2g04168 473 SUPERFAMILY Clavaminate synthase-like 134 301 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lomi2g04168 - -